Bathycoccus prasinos: Bathy06g04270
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Entry
Bathy06g04270 CDS
T03089
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bpg
Bathycoccus prasinos
Pathway
bpg00100
Steroid biosynthesis
bpg00909
Sesquiterpenoid and triterpenoid biosynthesis
bpg01100
Metabolic pathways
bpg01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
Bathy06g04270
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
Bathy06g04270
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bpg01006
]
Bathy06g04270
Enzymes [BR:
bpg01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
Bathy06g04270
Prenyltransferases [BR:
bpg01006
]
Terpene biosynthesis
Squalene/phytoene synthase
Bathy06g04270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Sugar_tr
Motif
Other DBs
NCBI-GeneID:
19015408
NCBI-ProteinID:
XP_007512409
UniProt:
K8EGB0
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All DBs
Position
6:complement(811237..812625)
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AA seq
462 aa
AA seq
DB search
MGAISVLLRHPFDVFPLLRVKKMADEAKKLPKEENLAFCYDMLNKVSRSFAIVIQQLDEE
LRDAVCIFYLVLRALDTIEDDMAIDNAEKVPQLLKFHEDIYDPEYKHLTCGEKHYKTLMV
EYPKVTNVFLRLKKPYKDVIADITRRMGKGMADFIESEVNTLKDWDVYCHYVAGLVGIGL
SDLWAGSKLEEKKFKTEMEDLSNAMGLFLQKTNIVRDYLEDIQEIPRPRMFWPRVVWGKY
ATSLDDLQYKKNRTNAVHCLNELITNALTHACDSLEYMSRVKTPSIFRFCAIPQVMAIAT
LAECYDNGKVFEGVVKIRRGLSARIMLSSNDTYQIGQGFKHFVKILKNKVRKEDPNRKET
MRLCDLATEKAQEMIDSSDRGKLEKLRNANNDQPLSMGVKVGLLTLFGGYAAYAFNLEQM
RESMGLNPKNGARWVDQMQQVFAVMGVLFVMFLMYSTRRTRR
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccatctcggtcctcctgagacatccgttcgatgtgtttcccttactcagggtg
aaaaaaatggccgacgaggcgaagaaactcccgaaagaagaaaacttggcgttttgttac
gacatgctgaacaaagtctcgcggtcgttcgcgattgttattcaacaattagacgaggag
ttacgagacgcggtgtgcatcttctatctggtgttacgagcgttggatacgatcgaggac
gacatggccatcgacaacgcggagaaagtaccgcagcttttgaagtttcacgaggacata
tatgatccggaatataaacacttaacgtgcggagagaaacattacaagacgctgatggta
gaatatccgaaagtgacgaacgttttcttacgattgaagaagccgtataaagacgtcatc
gcggacatcacgagacgcatgggaaaagggatggcggatttcatcgagagcgaagtgaac
acgttgaaagactgggacgtgtactgccattacgtcgccgggttagttgggattggtctg
tcagatttatgggccggatcaaagttggaagagaagaagttcaagactgaaatggaggat
ttaagcaacgccatggggttgtttttacaaaagacgaacatcgtgagagattatttggag
gacatacaggagattccgagaccgagaatgttttggccgcgagtggtgtggggaaaatac
gcgacgagcttggacgacttgcaatacaagaagaatcgaacgaacgcggtgcattgtttg
aacgagttgattacgaacgcgctgacgcacgcgtgcgactcgttagagtacatgagccga
gtgaaaacgccgtctatttttcgattttgcgcgattccgcaggttatggctatagcgaca
ttagcggagtgttacgataacgggaaggtgtttgaaggcgtggttaaaatccgaaggggc
ttatcggctcgcatcatgttatcgtccaacgacacgtatcaaatcgggcaaggtttcaaa
cactttgtgaagattttgaagaacaaagtgcgaaaagaagacccgaaccgtaaggaaacc
atgcgattatgcgatttggccacggagaaagcgcaagagatgatcgattcgagcgaccga
gggaaactggaaaagttacgaaacgcgaataacgaccaaccgttgtccatgggcgttaaa
gttggtttgttgacgttattcggcgggtacgccgcgtacgcgttcaacttggaacaaatg
cgcgagagcatgggattgaacccgaaaaacggcgctcgttgggtggaccaaatgcaacag
gtctttgccgtcatgggtgttttgtttgtgatgtttttgatgtactccacgcggcgcact
cggcggtga
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