Bathycoccus prasinos: Bathy07g01010
Help
Entry
Bathy07g01010 CDS
T03089
Name
(RefSeq) hypothetical protein
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
bpg
Bathycoccus prasinos
Pathway
bpg04120
Ubiquitin mediated proteolysis
bpg04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
Bathy07g01010
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
Bathy07g01010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bpg04121
]
Bathy07g01010
Enzymes [BR:
bpg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
Bathy07g01010
Ubiquitin system [BR:
bpg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
Bathy07g01010
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
Bathy07g01010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
WDR55
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
zf-RING_UBOX
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
Pcf11_C
Motif
Other DBs
NCBI-GeneID:
19014591
NCBI-ProteinID:
XP_007512083
UniProt:
K8FEE1
LinkDB
All DBs
Position
7:216024..218573
Genome browser
AA seq
849 aa
AA seq
DB search
MPIVAARKNLDDSRTCPICREIYKAPFNATCGHTFCHDCVVEHCGKFWELHHHHHHQQQQ
QQSAVGTNAVGPAVGEKKKKKKTTTTQTNEEEKEEKEEDEVEKKGTKTTTMIQTTKDFGK
LVDFSNPAPCPICNASITSLTPNVALTKVVDALARVDAMTMQITEEHSPMEPQHSKIARA
EKVVSALQHMDEEQLAPIVKALVEKHARAVAEGEEKRLEILRDFFDEATRRKRMKMAEGE
MEMKFLRTDIERVEKLLREELKVLKRSYTEAEGRTGGGEEEEEEEDDGEDVADMLRFVPQ
LPGYEGDACDEDEEFERKYHAGLSSLYTKGIKEIDGVNSSMRGREEVDDNDNDDDEEDGG
GNHRIEPASIDEKMNEERLEDFAQALTDAKQKYGRVRIVAEIVKPSLSMSSLSFNNNSLM
TQFGAVMNNNSNNNNNNIVNIINNNNNNNTIDTNNNNNINNENINNIDIINTSPIPPVSD
IVSSIDVSMDQTMFATAGVSKRIEFYTFTDICDRTAANQNEERPRITRAQIKVKSKISCL
SFSRKHVSHIAASDYEGVVTIWDAETSQSILKFEEHDKRCWTVEYCRCVDNMHLIASGSD
DGAVKIWSESGISMGGGNRSVMEIQMRANVCCIAWSPTTAHDIAIGCADHKVRVYDLRRP
HEPLYTLSSHKKAVSYVKYISSSELCSASTDSSVCIWDVKKTHDHNATFDPYNIYHNQQQ
FQGDDNGVPLPKMETNNGADGESDLVSSTRLIRTLTGHVNRKNFVGLAASSDGKSVACGS
ETNELFVYNKNFSAPVATVSFDTPGNDMKSSSRDHNSGNHFVSAVCWSDESTLISANSKG
RIKIVSLGM
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcgtggccgcgcgcaaaaacctggacgactctcgaacgtgcccgatatgccga
gagatttacaaagcgccgtttaacgccacgtgcgggcacacgttttgccacgactgcgtg
gtggaacactgcgggaaattttgggagcttcatcatcatcatcatcatcaacaacaacaa
caacaaagtgcggttggtactaatgctgttggccccgccgttggagagaagaagaagaag
aagaagacgacgacgactcagacgaacgaggaggaaaaggaggaaaaggaggaagacgaa
gtagaaaaaaaggggacaaaaacgacgacgatgattcagacgacgaaagattttgggaaa
ctggtggacttttccaacccagcgccgtgtccgatttgcaacgcgtcgattacttcgtta
acgccgaacgtggcgctgacgaaagttgtcgacgcgttggcacgggtggacgcgatgacg
atgcaaatcacggaggaacactcgccgatggaaccgcagcattcgaaaattgcgcgagcg
gagaaagtcgtctccgcgttgcagcacatggacgaagaacagttggcgccgatcgtgaaa
gcgctggtggagaagcacgcgagagctgtcgccgaaggcgaggagaagagattagagatt
ttgagggatttcttcgacgaggcgacgaggagaaagaggatgaagatggcggaaggggag
atggagatgaagtttttacgcacggacatagagagggtggagaagttgttgagagaagag
ttgaaggtgttaaagaggagctacacggaggcggaagggagaacaggaggaggagaagaa
gaagaagaagaagaagatgacggtgaagacgtggcggatatgcttcgatttgtaccgcaa
ctgcccgggtacgagggagatgcgtgcgatgaggatgaagagttcgaaaggaaatatcac
gctggattaagttcgctgtataccaaaggtatcaaagaaattgatggcgtaaacagtagc
atgagaggaagagaggaagtcgacgacaacgacaacgacgacgacgaagaagatggcggt
ggaaatcaccgcatcgaaccggcgagtatcgacgagaaaatgaacgaagaacggttagaa
gatttcgcgcaagcgctgacggacgcgaaacaaaagtatggacgcgtgcgcatcgtcgca
gaaatagtcaaaccgtccttatcaatgtcgtccttgtcgtttaacaataattctttgatg
acccagtttggagcggtgatgaacaacaacagtaataacaataacaacaacatcgtcaac
atcatcaacaataacaacaacaacaacactatcgacaccaataacaacaacaacatcaac
aacgaaaatatcaacaatatcgatatcatcaacacttcaccgattccaccggtaagcgat
attgtctcttccattgacgtctccatggaccaaactatgtttgccaccgcgggcgtttct
aaacgcatcgagttttataccttcacggatatatgcgaccgaacggcggcgaatcaaaac
gaagaacgtccgcggattacgagggcgcaaatcaaagttaaatcgaaaatatcgtgcttg
tctttctctaggaaacacgtctcgcacatcgccgcgtcggattacgaaggtgtggtgacc
atttgggacgcggaaacctctcaaagtattttaaaatttgaagagcacgacaagagatgt
tggacggttgagtattgcagatgtgtagataacatgcacttaatcgcctctggaagcgac
gacggcgcggtgaagatatggagtgagagtggtataagtatgggaggcggaaatcgaagc
gtcatggaaatacagatgcgcgcaaacgtgtgttgcatcgcgtggtcgccgacgaccgca
cacgatatcgccatcggctgtgccgatcataaagtacgcgtgtacgatttacgacgtccg
cacgagccgttatatacgctcagctcgcataaaaaagcggtttcctacgtgaaatatatc
agcagtagcgagttgtgttcggcgtcgacggattctagcgtgtgcatatgggacgtgaag
aaaacacacgatcacaacgcgacttttgatccttacaacatctatcataaccaacaacaa
ttccaaggtgatgataatggcgttcctcttcccaaaatggaaaccaacaacggcgcggat
ggagaatccgatctcgtcagcagcactcggctgattcgcaccttgaccggtcacgtgaac
aggaagaactttgttggattggcggcgtcgtccgacggaaaatccgtcgcttgcggctca
gagacgaacgagttattcgtgtacaataagaacttctccgcgcctgtagccacggtatcg
ttcgatactccagggaatgatatgaaaagttcctcgagagatcacaactctgggaaccac
ttcgtgagcgcagtttgttggtcggacgagtccacgctcatttccgcaaacagtaaagga
cgaataaaaatcgtatcgcttgggatgtga
DBGET
integrated database retrieval system