Bathycoccus prasinos: Bathy07g04890
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Entry
Bathy07g04890 CDS
T03089
Name
(RefSeq) hypothetical protein
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
Bathy07g04890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpg03400
]
Bathy07g04890
DNA repair and recombination proteins [BR:
bpg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
Bathy07g04890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
SLX1_C
RH_dom
Motif
Other DBs
NCBI-GeneID:
19014978
NCBI-ProteinID:
XP_007512074
UniProt:
K8F269
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All DBs
Position
7:complement(953400..954596)
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AA seq
398 aa
AA seq
DB search
MLSPPSPSPASQRKNDDDDDDEKGFDEGVFACCYLVASLSEQHKGKTYVGFTVNPKRRLL
QHNGQYANAGAKYTKKLRPCEMVLCVYGFPTKTQALGFEWAWQNPTTSRAVKDLAQNKLK
IGSRHSTILNKSLLGLAMLNLSPWRHLPLVVHFFNDTHKRDVLENAEKKDVNIPSHVRVE
VGEMNELDAYVKEHNPTKTSKKKRRKRDDNDDDDDDLESEDFLPLQSQDSDIFMSSQRVS
KQQHQQHQQHVCEVCLRQSNSTEGGNNTDSEYADEEEVCCTCSSCGAHAHLVCLAENFFK
YGRDLHSDKENRDEDAIHESYELIPEKGPCPRCDRVQSWGDVLASRSRGKRNVAPKHRAQ
DSADKEMNTAEKRAQKRAKINSWTEEIEIDSLSPPAFG
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgctctcaccaccatcgccatccccggcatcgcaaaggaaaaacgacgacgacgatgac
gacgaaaaaggatttgatgaaggagtgtttgcgtgctgctaccttgtcgcgtctttgtcc
gaacagcacaaaggtaaaacgtatgttggttttaccgtgaatccaaagaggagactttta
caacacaatgggcaatacgcgaatgctggagcgaagtatacgaagaaattacgtccttgt
gagatggtattgtgcgtgtacggtttcccaacgaaaactcaggcactcggcttcgaatgg
gcttggcaaaatccaacgacgtcgagggccgtgaaagacctggcgcagaacaaactcaag
attggaagtcggcattcgacaattttgaataaatctcttttagggttggccatgctgaac
ttatctccttggagacatttaccgctcgtcgttcattttttcaacgatactcacaagcgc
gacgtgcttgaaaacgctgagaaaaaggatgtaaatattccatcgcacgttcgagttgaa
gtcggagagatgaacgaacttgacgcgtatgtgaaggaacacaatccaacaaaaacatct
aagaagaaaagaaggaaaagagacgacaatgatgatgacgatgatgatttagagagcgaa
gattttttacctctccagtcccaggactcggatattttcatgagctcgcagcgtgtctcg
aaacaacaacatcaacaacatcaacaacacgtttgtgaagtgtgccttcgacaatcaaac
agtaccgaaggaggtaataataccgattcagagtacgccgacgaggaagaagtgtgttgt
acgtgctcttcatgtggtgcgcacgcgcatttggtatgtttagcagaaaatttttttaaa
tacggtcgtgatttgcatagcgacaaagagaaccgagatgaggacgcgattcatgaaagc
tatgaactgattccggaaaagggaccatgcccgcgatgcgatagggtccaaagctgggga
gacgttttagcctcgcgttcgagagggaaacgcaacgtagcgccgaaacatcgcgcacaa
gatagtgctgataaagagatgaatacggcggagaaaagagcccaaaagcgtgcaaagata
aattcatggacggaggagatagaaatcgattcgctatcgccaccagcgttcggttaa
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