Bathycoccus prasinos: Bathy08g01660
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Entry
Bathy08g01660 CDS
T03089
Name
(RefSeq) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Bathy08g01660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpg03041
]
Bathy08g01660
03009 Ribosome biogenesis [BR:
bpg03009
]
Bathy08g01660
Enzymes [BR:
bpg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Bathy08g01660
Spliceosome [BR:
bpg03041
]
Complex A
U2 snRNP components
U2 related factors
Bathy08g01660
Complex B
Bathy08g01660
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
Bathy08g01660
Ribosome biogenesis [BR:
bpg03009
]
Eukaryotic type
90S particles
Helicases
Bathy08g01660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
HA2_N
Helicase_C
AAA_22
AAA_19
SRP54
ResIII
AAA_30
ABC_tran
nSTAND3
T2SSE
Helicase_RecD
AAA_24
ATPase
FtsK_SpoIIIE
TniB
AAA_29
AAA_16
Motif
Other DBs
NCBI-GeneID:
19014145
NCBI-ProteinID:
XP_007511797
UniProt:
K8F8K9
LinkDB
All DBs
Position
8:complement(298712..300847)
Genome browser
AA seq
711 aa
AA seq
DB search
MSSTTPKKKQRVQVSLDGDDANNKEEMMMINPYTHQPYSQTYLNILETRRKLPVWKQKSD
FLHQLAASQTLVLVGETGSGKTTQIPQFLVDAGYTNEESKMVVCTQPRRVAAMSVAKRVA
EEMDVQIGEEVGYSIRFEECTSRKTIMKYATDGMLLREAMTDPLLSRYSVIVIDEAHERT
LATDVLFGLLKEVLKKRPEDLKCVVMSATLEAKKFQGYFEGAPLVMVPGRTHPVEIFYTQ
EPERDYLEAAIRTVVQIHRCEPPGDVLLFLTGEEEIEDACGKIRNEIKNIGDSVGPVNVV
PLYSTLPPNQQQRIFDKAPDALTVGGVAGRKVVVSTNIAETSLTIDGIVYVVDPGFSKQK
VYNPRSRVESLLVSPISRASAQQRAGRAGRTQPGKCFRLYTELSFKKDLIEQTYPEILRS
NLGSVVIQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLGALDDEGELTKAGKIMSDF
PLDPQLAKMLVGSTKFKCSNEIVTIVAMLSVPQCFIRPRDDQQRADAAKAHFAHLDGDHL
TMLNAYHAFKQNGESQNWCWENYLNHRSLKSADNVRNQLVRLCQRHGVLLESTDFHSKDY
YVNIRKAILNGFFMQVAHKERNGSYLTVKDNESVLLHPSTNLSGKPEWVVYNEFVLTSKK
YVRTVTEIKGEWLIDLAEHYYDLSNFPSCAAKNALQQLYTQRERTHKGGKK
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgacgacgccgaagaaaaagcagcgagtacaagtttccctcgatggtgacgat
gcgaacaacaaagaagaaatgatgatgataaatccgtacactcatcagccgtattctcaa
acctatctgaacatcctcgagacgaggcgaaagcttcccgtgtggaaacaaaaatcggat
tttcttcaccagttggcggcttcgcagactttagtgctcgtcggggaaaccggttcgggg
aagacgacgcagatcccgcaatttctcgtcgacgccgggtacacgaatgaagaatctaag
atggtggtgtgcacgcaaccgagacgcgtggcggcgatgtcggtggcgaaacgagtcgcc
gaggagatggacgtgcaaataggggaagaggttggatattcgattcggttcgaggagtgc
acgtcgcgaaagacgatcatgaagtacgccacggacgggatgttactcagagaagcgatg
acagatccattattgagtcgatattcagtgattgtgatcgacgaagcgcacgagaggacg
ttagcgacggacgttttgtttggattgttgaaggaggtgttgaagaagcgaccggaggat
ttgaagtgcgtggtgatgtcggcgacgttggaggcgaagaagtttcaggggtattttgaa
ggcgcaccgttggttatggttccggggagaacgcatccggtggagatattttacacgcaa
gaacctgagagagattatttggaagcggcgattcggacggtggtgcaaatacaccggtgc
gaaccacccggggacgtgcttttgtttttaaccggcgaggaggaaatcgaagacgcgtgc
gggaagattaggaacgagattaagaatatcggggacagcgtcgggcctgtgaacgtggtg
ccgctatattcgacgttaccgccgaatcaacagcagaggatttttgataaagcgccggac
gcgttaaccgtcggaggcgtcgccgggagaaaagtggtcgtgtccacgaacatcgccgag
acgtctttgacgattgatgggatcgtctacgtcgtcgacccggggttttcgaaacagaaa
gtgtacaatcctcgaagtcgagtggaaagtttattagtctcgccaatttctcgagcgtcg
gcgcaacaaagagccgggagagccgggagaacccaacccgggaagtgttttcgattatac
acggaactttccttcaagaaagatttaatcgaacagacgtacccggagattttgcgatcg
aatttaggctcggtcgtcatccagttgaaaaaattaggcatcgacgacttggtccatttc
gatttcatggaccctccagcgccggaaacgttaatgcgcgcgttagaattgctcaactat
ttaggcgctttagacgacgaaggcgagctgacgaaagccgggaaaatcatgtccgatttc
ccgttagatcctcagttggcaaagatgttagtcgggagcacaaagtttaagtgttcgaac
gaaatcgtgaccatagtcgccatgctttccgttccgcagtgtttcattcgcccgcgagac
gatcaacaaagagcagacgccgcgaaggcgcactttgcgcatttggacggcgaccatttg
accatgttgaacgcctaccacgcgttcaaacaaaacggcgagagccaaaactggtgctgg
gaaaactacttaaatcaccgatcgttgaaatccgcggataacgtccgcaaccagttagtc
cgcttatgtcaacgccacggcgtcctcctcgaatccaccgacttccactctaaagactat
tacgtcaacatccgcaaagccatcttaaacggcttcttcatgcaagtcgcgcacaaagaa
cgaaacggctcgtacttaaccgtcaaagacaacgaatcggttttgttgcacccgtctacg
aatttaagcggtaaacccgagtgggtcgtgtacaacgagtttgtcttgacgtccaagaag
tacgtccggacggtcacggaaatcaaaggcgagtggttaatcgacttggccgaacattat
tacgatttgagcaacttcccgagttgcgccgccaaaaacgcgttgcagcagctgtacacg
caacgagagagaacgcataagggtggtaagaagtag
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integrated database retrieval system
