Bathycoccus prasinos: Bathy08g01930
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Entry
Bathy08g01930 CDS
T03089
Name
(RefSeq) ubiquitin
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03010
Ribosome
bpg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Bathy08g01930
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
Bathy08g01930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
bpg03011
]
Bathy08g01930
04121 Ubiquitin system [BR:
bpg04121
]
Bathy08g01930
Ribosome [BR:
bpg03011
]
Ribosomal proteins
Eukaryotes
Large subunit
Bathy08g01930
Archaea
Bathy08g01930
Ubiquitin system [BR:
bpg04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
Bathy08g01930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
DUF2604
UBL_UBAC1
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Dsc3_N
Plexin_RBD
Motif
Other DBs
NCBI-GeneID:
19014172
NCBI-ProteinID:
XP_007511521
UniProt:
K8EHK7
LinkDB
All DBs
Position
8:complement(join(351165..351530,351906..351944))
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AA seq
134 aa
AA seq
DB search
MLYRVFASFDTVCLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR
TLADYNIQKESTLHLVLRLRGGIIEPSLIVLARKSNQDKKICRKCYARLHPRAVNCRKKK
CGHTNQLRIKKKLK
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgttgtatcgtgttttcgcatcgtttgataccgtctgcctcacgggcaagacgatcacc
ctcgaagtcgagtcttcggacactatcgacaacgtcaaggcgaaaatccaagacaaagag
ggcatcccgccggatcagcagcgattgatcttcgccggaaaacaattagaagatggccga
actttagccgactataacattcaaaaagaatccaccttgcacttggtcttgcgtttgcgc
ggcggcatcatcgagccgtccttgatcgtcttggcgagaaaatccaaccaagacaagaaa
atttgccgcaaatgttacgctcgattacacccgagagcggtcaactgcagaaagaaaaag
tgcgggcacacgaaccagttgcgcatcaagaagaagttgaagtaa
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integrated database retrieval system
