Bathycoccus prasinos: Bathy08g02490
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Entry
Bathy08g02490 CDS
T03089
Name
(RefSeq) SWI/SNF transcription activation complex subunit (ISS)
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
Bathy08g02490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpg03021
]
Bathy08g02490
03036 Chromosome and associated proteins [BR:
bpg03036
]
Bathy08g02490
Transcription machinery [BR:
bpg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
Bathy08g02490
Chromosome and associated proteins [BR:
bpg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
Bathy08g02490
PBAF complex
Bathy08g02490
GBAF(ncBAF) complex
Bathy08g02490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
19014228
NCBI-ProteinID:
XP_007511743
UniProt:
K8EIN7
LinkDB
All DBs
Position
8:458506..460026
Genome browser
AA seq
506 aa
AA seq
DB search
MPSAPLTKAKQRAARLLQQQQHAYEQNVFNSYRRNGVAVSSSSGGGNATTNTGFAPSGGG
KAHAHFPPTVRKSSVANVSVDIERNVECVLSRKRAEMIESSGMHEKQRRVLRVYLFNTHN
NDQVNNTNEGEENSLQATGKTKKVLKFTFGKKKDDGVGVVPGGIAATTAAVAEKKSNEAP
PPPPPPRSFNCDGTEKKWTFHVQGRVVNERDAEVDAREVLSSGGGGGGLKFSHFIERMKI
DVYDEQQNGKLVKSVAWERKECGVPKDGFTITVPGAKDSMRVRCEIHLRNDPPKFQLSGM
LADVVGKEEESAGRVVYALWSRCKALELVSEKDQSMVELDETFLELCEKNPLFKEKKVGD
VVPFRSVCIACTSRTHMPKISEPLVFEYKVRPYGPSPAHCDCYDVNVETLPPAAVGQNSA
VTKYSAATNEPEELEQRIFQDSNFIDFARKRRAYLLSFSQDPQAFIDNCLMEYSEMFQGV
PRRREAWSKEWTSDAAMRVLEKQRSS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcgcaccgttaacgaaagcgaaacaacgcgccgctcgacttttgcagcagcaa
caacacgcgtacgagcaaaacgtgttcaacagctaccggaggaacggcgtcgcagtttcc
tcgtcttcgggaggaggaaacgcgacgacgaatactggtttcgccccatcaggaggaggg
aaagcacacgcgcacttcccaccaaccgttcgaaaatcctccgtcgcgaatgtatcggtg
gatatcgaacggaacgtggagtgcgtgctctcgaggaaacgcgcggagatgatcgaatcc
tccggcatgcacgaaaaacagaggagagttctgagagtgtatctgttcaacacgcacaac
aacgaccaagtgaataacacgaacgaaggcgaggaaaactcgttgcaggcgacagggaag
acgaagaaagtgttgaagtttacgttcgggaaaaagaaagacgacggcgtcggagtcgtc
ccgggtgggatcgcggcgacgacggcggctgtcgcggaaaagaagtcaaacgaagcgcct
cctcctcctcctcctcctcgttcgtttaactgcgacgggacggaaaagaagtggacgttt
cacgtgcaaggacgcgtggtgaacgagcgagacgcggaagtggacgcgagggaggtgttg
tcgtcgggaggaggaggaggagggctgaagttttcgcactttatcgaacggatgaagatt
gacgtgtacgacgaacaacaaaatggaaagttggtgaagagcgtcgcgtgggaacgtaag
gaatgcggggttccgaaagatgggttcacgattaccgttcccggggcgaaagattctatg
agagtgagatgtgaaatacacttaaggaacgatccgccaaagtttcaattgagcggaatg
ttagccgacgtcgtggggaaagaggaagagagcgctgggcgagtggtgtacgcgttgtgg
agtcgatgtaaagcgttggagttagtctcggaaaaagaccaatcgatggttgaattggac
gagacgttccttgagttgtgcgaaaagaaccctttgttcaaggagaaaaaagtgggcgac
gtcgtgccgtttagatccgtgtgcattgcgtgcacgtcgcgaacgcacatgccgaaaatc
tcggagccgttagtgttcgaatataaagtccgtccgtacggcccgtctccagcacattgc
gattgttacgacgtgaacgtcgaaactttaccgcccgcggcggttggccagaacagcgcg
gtgacgaagtattccgctgccacgaacgaaccggaagagttggagcagagaatattccaa
gactccaactttatcgatttcgcgagaaaacgaagagcgtatttgctgagcttctcgcaa
gacccgcaagcgttcatcgacaactgcttgatggaatactcggaaatgttccaaggcgtt
ccgagacggcgagaggcgtggtcgaaagagtggacaagtgatgcggcgatgcgcgtgcta
gaaaaacaacgcagtagttag
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