Bathycoccus prasinos: Bathy09g02390
Help
Entry
Bathy09g02390 CDS
T03089
Name
(RefSeq) PREDICTED: similar to Zinc finger protein 271 (Zinc finger protein 7) (HZF7) (Zinc finger protein ZNFphex133) (Epstein-Barr virus-induced zinc finger protein) (ZNF-EB) (CT-ZFP48) (Zinc finger protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
bpg
Bathycoccus prasinos
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpg03009
]
Bathy09g02390
Enzymes [BR:
bpg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Bathy09g02390
Ribosome biogenesis [BR:
bpg03009
]
Eukaryotic type
90S particles
Helicases
Bathy09g02390
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
DEAD
zf-C2H2_4
Helicase_C
zf-C2H2_jaz
zf-C2H2_6
zf-met
zf-C2H2_15
C2CH-3rd_BIRD-IDD
zf-C2H2_11
ResIII
GAGA
zf-C2H2_ATbp_3rd
Zf-C2H2_ZNF451
zf-C2H2_16
Teflon_C
Motif
Other DBs
NCBI-GeneID:
19013746
NCBI-ProteinID:
XP_007511196
UniProt:
K8FF18
LinkDB
All DBs
Position
9:complement(join(434765..435980,436346..437275,437339..438168))
Genome browser
AA seq
991 aa
AA seq
DB search
MRRKNPHPKRAVNARTVLKVSRDKEEEVEEEEPLVLCLKIPDEDDDLEANHHQIQKEEEG
EEGEDDDVERLWRIMCVPRDDVVEQNQTRKDAKGVKRKRGHECDFCEKVFRYPSGLAVHM
RIHANEKPYECDVCEKCFRQAGDLQRHVRIHTNEKPYECDVCEKRFARSGSLKIHMRIHT
NEKPYECDVCDKAFRESSSLKRHMRIHTNEKPYACDVCEKAFRQSGALKTHMRIHTNEKP
YECDVCEMRFSRSENLKTHKRTHTNEKPYECHVCEKSSKSSHALTYTSSHKNKNITKRVF
LGKRERNDSSVWKYFCHISALHNNTMGTTTHEPTTSSNSLNLVHSKASKAFANLCGNLAQ
FNNKRFGNDLEKFATKSRKRFDGGKKTTTETRENSSSEASSSSSSSSSSDDDDDDDDDES
SDDDVNDDERKISMFAKNANAKKKKANLHSNGHHQTEEELANIRRKEYKIKVKGDDSRNV
IPAPLESFKDLETTYGCSKSLITRLEECKWLEPTPIQRQAIPMMLRDVETLAVAPTGSGK
TLAFLLPIFMRLGKRKDGGVRAILLAPTKELATQSTRICTLLSDGLRVTQLSKANAANDF
DKVDILISTPLRLASLLRQKKISTHAVEFLVLDEADKLFEMGFVEQIDAVVHACDNPDYT
NDDDDKKKKKKKKKKSPSSKTTKKKKCLKALFSATLPETAERLARSVMHHCVRLTVGERN
SANESISQKLIFCGKESGKILAVKQMVQKGVQTPLIIFAQSKDRCIQVAKELTGGALGEV
GLIHSDMSDKKRKSIVDLFRIGKLNCLCATDLMARGMDFAAVGTVVNFDFPLTSTAYIHR
IGRSGRAGRVGNAVTFFTEEDAKRGTVRSIARVMQRSGCDVPKWLLNLEADKNEKKYKPL
RKDGRENNPRRDRVDNKEGYVSRDIRAGKKKLEHKKQRKAMFKEMKKAAAATTVEKNMTS
NEDDKEDDYFPRDNDDDNAARNKKRNRRSSK
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgagacgaaagaatccacatcctaaacgcgcggtgaacgcgaggacggttttgaaggtt
tcgagagataaagaagaagaagtggaggaagaagaacctttggtgttgtgtttgaagatt
cctgacgaggacgatgatctcgaggcaaatcatcatcagatacaaaaagaagaagaggga
gaagagggagaagacgacgacgtagagcgattgtggaggattatgtgcgtgccacgtgac
gatgtcgtggagcaaaatcagacgcggaaagacgctaaaggagtgaagagaaagagaggg
cacgagtgcgatttttgcgagaaggtgtttcgatatccatccggtttggccgtacacatg
cgtattcacgcgaacgagaaaccgtacgaatgtgatgtgtgcgagaagtgctttcgtcaa
gctggtgatttgcaaaggcacgtgcgtattcacacgaacgagaaaccatacgaatgtgat
gtgtgcgagaagcgttttgctcgatctggtagtttgaaaatccacatgcgtattcacacg
aacgagaaaccgtatgaatgcgatgtgtgcgataaagcttttcgtgaatctagtagtttg
aaaaggcacatgcgtattcacacgaacgagaaaccgtatgcatgcgatgtgtgcgagaaa
gcttttcgtcaatctggtgctttgaaaacccacatgcgtattcacacgaacgagaagccg
tacgagtgtgatgtgtgcgagatgcgttttagtcgatctgaaaatttgaaaacccacaag
cgtactcacacgaacgagaaaccgtacgaatgccacgtttgcgagaagagttctaaatca
tcgcatgcactgacatacacatcatcgcacaagaacaaaaacataacaaagagagttttt
ttgggaaaacgagagagaaacgactcttccgtctggaagtatttttgccacatttctgct
ttgcacaacaacaccatgggaacaacaacacacgaaccaacgacgtcctcaaactcgctc
aatctcgtgcattcgaaagcctcgaaagcgttcgccaatctgtgcgggaatttagcgcag
ttcaacaacaagaggttcgggaacgacttggagaaattcgcaacaaaatcgaggaagcgt
tttgacggcgggaaaaaaacgacgacggaaacgagagagaattcatcgtcggaggcgtct
tcttcctcctcttcttcgtcctcttctgatgatgatgatgacgacgatgacgatgaaagt
agcgatgacgacgtaaacgacgacgaacgaaagatatccatgtttgcgaaaaatgcaaac
gcgaagaagaagaaggcaaatttgcactcgaatggtcaccaccaaacggaggaggaactg
gcgaatatccgcagaaaagaatacaagattaaagtgaaaggagacgactcgcgaaacgtg
ataccggcacctttggaaagttttaaggatttagaaaccacgtacggatgttcgaagtct
ttgattacacgattagaggagtgcaaatggctcgagccgacgccgattcaacgacaagcg
ataccgatgatgctgagagacgtggagacgttggcggtggcgccgactgggagcgggaag
acgctcgcttttttgttacctatatttatgcgactcgggaagaggaaagatgggggggtg
agagcgattttgttagcgccgacgaaagagttggcgacgcaatcgaccaggatttgtact
ctgttgagcgacggattgagggtcacgcaactctccaaagcgaacgcggcgaacgatttc
gataaagttgacattctcatctctaccccgttacgattggcgtcgcttttaagacaaaag
aaaatttcgacgcacgcggttgaattcttagtcctggacgaagccgataaactcttcgag
atgggtttcgtggagcaaatagatgccgtcgtgcacgcgtgcgataatccagactataca
aacgacgacgacgataaaaagaaaaagaaaaagaaaaagaaaaagagtccctcatcgaag
acgaccaaaaagaaaaaatgtctcaaagctttattctccgcgacgcttccggaaaccgcc
gagcgattagcgcgaagcgtcatgcatcactgcgttcgtctcaccgtcggcgaaagaaac
tccgccaacgaatccatttcgcaaaaactcatcttttgtggcaaagagagcgggaaaatt
ttagccgtcaagcaaatggtccaaaagggcgttcaaacgccattgattatctttgcgcag
agtaaagatcgatgcatccaagtcgcgaaagagttaaccggaggtgcgttaggcgaagtt
gggttaattcactcggacatgtccgataagaaacgcaaatccatcgtcgatctgttccga
ataggcaaactgaactgcttgtgcgccacggatttgatggccagagggatggatttcgcc
gccgtaggcaccgtcgtcaactttgatttcccgttaacgagcacggcgtacatccatcgc
atcggacggtcgggaagagccggccgagttggaaacgcggtcactttcttcaccgaagaa
gacgcgaaaagaggcacggtgcgttccatcgcgcgagtgatgcaacgcagcggctgcgac
gtcccgaagtggttgttaaatctcgaggcggataaaaacgaaaagaagtacaagccgttg
cgaaaggacgggcgcgagaacaacccgagaagagaccgagtcgacaacaaagaaggctac
gtttcgagagacattcgcgccgggaagaaaaagttggaacacaagaaacagaggaaagcg
atgttcaaagagatgaaaaaagccgctgccgcgaccaccgtcgagaagaacatgacatcc
aacgaagacgacaaggaagacgactacttcccgcgagataacgacgacgacaacgctgct
cggaacaagaaaaggaacagacgctcgtctaaatga
DBGET
integrated database retrieval system
