Bathycoccus prasinos: Bathy10g00110
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Entry
Bathy10g00110 CDS
T03089
Name
(RefSeq) DNA polymerase lambda
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03410
Base excision repair
bpg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Bathy10g00110
03450 Non-homologous end-joining
Bathy10g00110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpg03400
]
Bathy10g00110
Enzymes [BR:
bpg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bathy10g00110
DNA repair and recombination proteins [BR:
bpg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
Bathy10g00110
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
Bathy10g00110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
NTP_transf_2
DXPR_C
MG3
UBA_4
HHH_5
Motif
Other DBs
NCBI-GeneID:
19013088
NCBI-ProteinID:
XP_007510805
UniProt:
K8F9R6
LinkDB
All DBs
Position
10:complement(13367..15586)
Genome browser
AA seq
739 aa
AA seq
DB search
MRKTKERQIRKQKEEEKDGDDEYTETVKPDVKLPKQKAFRVDATPTTVGNNSISNTAKTT
TTINTSKDVEVTASMQTSDIVLNEKSVYGVLDENMSRKKSAREPYRTLRESVMRDERRKR
KKTSLKDAGNDDDDEILFVVYIDSSVGKTRFDIFAKNVPEKLGGLVVSHVEKSIIDSNAL
LVGSLVVNDATRGGKHKSKIEPKKKKKRKGKKEDEEIGVSHVVTTKEGFAKYEKSVPDEC
VTKFVSPEYLAACLKEKKIIVPIEEKWSFAAVADAKISPIEKPTPEMPKGESKEKKEKRG
EESHHDEEILTLMELAQISLEQARVALVHFGYSLEVAVEAFLEGKVSFTEINGEQTLVEN
ASKQASMESDVRQNYYHSLENMKKIKKHFMCQPAERVGNQDANKSLIDMFSNYGALLQDM
YPDNKQQRGRGNAYVKIARLLESTPYELTPNNIDDFIEKNRRGGQGMGESMCNKLKYAVS
FKVLPEYEAFLKDPSVIAVKDMSRVHGIGTKTAYKFYERFNLKSVEDLRALLSSGDPNNI
LKNDMRISLKYLEDLEDRIPREEAKEIGDFVRESVENIVKGAQVEVAGSYRRGKPTCGDV
DVLVCLKENQKKDGVLQNIVDDIDRRGLISARLSQGTFGQDNFMGVCKLPDGKENRKHRR
LDIKIYEPKQFATALLYFTGSGRFNRSMRTYTHMMGWHLDDKGLYMDRNKSRRVETVTEQ
DIFAALGLDYVRPQDRSVG
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagacgaaagagcgacaaattaggaagcaaaaagaagaagagaaagatggcgat
gatgagtatacggagactgtgaagcccgatgtaaaacttcctaaacaaaaagcgtttcgt
gtcgacgcgacgccgacgacggtgggaaacaatagcataagtaacacggcgaagacaaca
acaacaataaatacatcaaaggacgtagaagttacggcgtcaatgcaaacatcagacatc
gtgttgaatgaaaaatctgtttacggtgttttggacgagaatatgtcgcgaaagaagagc
gcaagagaaccttatcgcacgctacgcgaaagcgttatgagggacgagcgaagaaagcgg
aagaaaacgtctttgaaggatgcgggcaacgacgacgacgacgaaatcctgtttgttgtt
tacatagattctagcgtaggtaaaacaaggttcgacatatttgcaaaaaacgttccagaa
aagctcggagggctagtcgtttctcatgtggaaaagtcgataattgattcaaacgcgctt
ttagttgggagtctcgttgtgaacgacgccacaagaggtggaaaacataaatccaagatc
gagccaaagaaaaagaaaaagaggaagggaaagaaagaagacgaggagattggcgtctcg
cacgtagttactacgaaagaaggatttgccaagtacgaaaagagtgtgccggatgagtgc
gtgaccaagtttgtatctccggaatacctcgcggcgtgcttgaaagagaagaagattatt
gtacccatcgaagagaaatggtcctttgccgcagttgcggacgcaaagatatcgccgatc
gagaaaccaacgccagaaatgccgaaaggagagagcaaagagaagaaagagaagagagga
gaagaaagtcatcacgatgaagaaatcttgactctgatggaactcgcgcaaatttcgctc
gagcaggctcgcgtcgcactggtacattttggatattcgttagaagttgcagtagaagct
tttctggaaggcaaggtttccttcacggagattaatggtgagcagacgctggttgaaaac
gcatccaagcaagcgtccatggaaagcgacgttcggcagaactactatcacagcttggaa
aatatgaagaaaatcaagaagcatttcatgtgtcaacctgcagaacgcgttggaaaccag
gacgccaacaagtcactcatcgatatgttctcgaattatggagcattgcttcaggatatg
tacccagataacaagcaacaaagagggcgggggaatgcgtatgttaaaatcgcgcgtttg
ctggagagcacgccgtacgagttgacgccaaacaacatcgacgatttcattgagaagaac
aggcgcggaggtcaaggcatgggagagagcatgtgtaataagctcaagtacgccgtctcg
tttaaagttttaccggaatatgaggcgtttttgaaggatccttccgtcatcgcggtgaaa
gacatgtctcgagtgcacggaattggaacaaaaacagcgtacaaattttatgagcgattt
aacttgaagtcggttgaggatttgcgcgcgcttctgtccagtggcgatccaaacaatatt
ctgaagaacgatatgcgcatcagcttgaaatatcttgaggatttggaagatcgcattccg
cgggaagaagcgaaagagattggcgatttcgtccgcgaaagcgtcgagaatattgtgaaa
ggcgctcaagttgaagttgctggttcgtatcgacgaggaaagccgacgtgcggtgacgtc
gacgttttggtgtgtttaaaagagaatcaaaagaaagatggtgtgttgcaaaatatcgtc
gacgatatcgatcgaagaggcttgatttcggcgagattgtcgcaaggcacgttcgggcaa
gataacttcatgggtgtctgcaagctcccggacggcaaagaaaaccgcaaacaccgcaga
cttgacatcaaaatatacgagcccaaacagttcgcgacggcgttgctatattttacgggt
agtggccgcttcaaccgatcgatgcgtacgtatacgcacatgatgggttggcatttagac
gacaaaggattgtacatggacaggaacaaatcgaggcgagtagagactgtgaccgaacaa
gacatcttcgcggcactggggctagattatgtgcgcccgcaagatcgaagcgttggatag
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