Bathycoccus prasinos: Bathy10g03340
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Entry
Bathy10g03340 CDS
T03089
Name
(RefSeq) Snf2 family protein
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Bathy10g03340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpg03400
]
Bathy10g03340
DNA repair and recombination proteins [BR:
bpg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
Bathy10g03340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
19013507
NCBI-ProteinID:
XP_007510675
UniProt:
K8F9B7
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All DBs
Position
10:complement(622421..624802)
Genome browser
AA seq
793 aa
AA seq
DB search
MMFATPPKKNKKSLPQILVVSDTDDDDDDEGGGHHKKPQEENEKVYNYKPLHDPCAPNAL
VLVTAEEARKKLDDESGFGGREKNKVPCVAVVMDPNIARKLRKHQKEGVRWMYRKLFGFD
DENKKNNNNSEISSNRNSNTNIIENSGVLLADDMGLGKTLQVLALAWTVLKQTPFPTLKK
PFKRILVTCPATLVGNWGNESKKWIGNVRAQCVTADGGAENVERAFQKWIETNENVEEKP
MQSSFDRFPILIASYETMRKMALRIPNHARPDLLYCDEAHRLKSDSNQTVDALKAVNAKH
RVLMTGTPIQNNLMEFAAILDVVQPRAKAIFGWNSLEEFKEMYERPIMEARASEANAEQK
KRGKELEAQLRKVTKKRILRRKAELVLKEYLVPKTEYLMLCNMSGKQKRCYEAGSNYFKK
NTNKNNNALSAIGILRQCANSAKHCLDAIGRSTVLDKTFSNTIRDAAEKKEEEDDEGEEE
CSGKLSALCLLLQSLKGINEKNRSVNNGNYQRVVIVSGYSDQLDDADKLCKREGLTTTRL
DGSVDKDKRSEMVRNFNTGNVDVMLLSVRAGGAGLNLIGANCLILMDASWNPADDRQAMA
RVWRDGQQKPVFVYRLASLGTVEERVLLRQLGKESLLMEEKKEREEKEEEEEEEEEEFSL
EKEEVGKLVEFKRNGHNEEWKDVRSRKQKHEALITNSLALMDCQSEARLVQCVVKASCTV
HDDDDTDDDDTDDGEREGENVEKKKKKKKKNNFYVPPKKETTGNSAATKRVAFEDLMRAT
TATVKKKKNSTCR
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcgccactccgcctaaaaaaaacaagaagagcctcccgcaaattttggtcgtt
tcagataccgatgatgacgatgatgacgaaggaggaggtcatcacaaaaaaccacaggag
gagaatgaaaaagtttataattataaaccgttgcacgacccgtgcgccccgaacgcgtta
gttttggtcaccgctgaagaggcgagaaagaaattagacgatgagagtggttttggtggg
agggagaaaaacaaagtgccttgcgtggcggtcgtcatggacccgaacattgcgagaaag
ttacgaaagcaccaaaaagaaggcgttcgatggatgtatcggaagttgttcgggtttgat
gatgaaaataagaagaacaacaacaacagcgagattagcagcaataggaatagtaatacc
aatattatcgagaactctggagtgttactcgcggacgatatgggattgggcaagacgttg
caagtgctcgcgctggcgtggacggtgttgaaacagacgccgtttccaacgttgaagaaa
ccgtttaaacgaattttagtcacttgtccagcgacgttagttgggaattgggggaatgag
agtaagaaatggatcggtaacgttcgagcgcagtgcgtgactgcggacggcggcgccgag
aacgtcgaacgggcgtttcagaaatggatcgagacgaacgaaaacgtggaagagaaacca
atgcaatcatcgtttgataggtttccgattttgatcgcttcttacgaaactatgaggaaa
atggctctcagaataccgaatcacgccagaccagatttattgtattgcgacgaggcgcac
agattgaaatccgattcgaatcaaaccgtagacgcgttgaaagcggtaaacgcgaaacat
cgcgtgttgatgacgggaacaccgattcagaacaacttgatggaatttgcggcaatttta
gacgtcgtgcaaccgcgcgcgaaagcaatttttgggtggaactcgttggaagagttcaag
gaaatgtacgagagaccaatcatggaagcgagagcgagcgaggcgaacgcggagcaaaag
aagagagggaaagagttggaggctcagttgaggaaagtgacgaaaaaaagaatcctgagg
aggaaagcagagctcgtattgaaagagtatttggtgccgaaaacggagtatttgatgttg
tgcaacatgtccgggaagcagaaaagatgttacgaagctggctcaaactatttcaaaaag
aatacgaacaagaacaacaacgcgttgagtgcgattggcattttgaggcagtgcgcgaat
tctgcaaaacactgtttagatgccatcggtcgatcaaccgtgctcgataagacgttttcg
aataccattcgcgatgcagcagagaagaaagaagaagaagacgacgaaggagaagaagaa
tgtagcggcaaattaagcgctctttgtttgcttttgcaatctttgaaaggtataaacgag
aaaaatagaagcgtaaacaatggcaattaccagcgcgtagtgattgtttctgggtattcc
gatcagttagacgacgccgataagctgtgcaagcgcgaaggattaacgacgactagattg
gacggttccgttgacaaggacaagcgttccgagatggttcgaaatttcaacaccggcaac
gtagatgtcatgttactttccgtccgcgccggcggcgctggtttgaacttgattggtgca
aattgtttgatattgatggatgcgagttggaaccccgcagacgatagacaagctatggcg
agagtatggcgagacggacaacagaaaccggtgtttgtgtatcgattggcgagtttagga
accgtggaagaacgcgtattgttgagacaacttgggaaggaatcactgttgatggaggaa
aaaaaagaacgagaagaaaaagaagaagaggaagaagaagaagaagaagagtttagttta
gaaaaggaggaagttggaaaactcgtggagtttaaaagaaacggccacaacgaggagtgg
aaagatgtgcgatcgaggaaacaaaagcacgaagcgttgattacgaactctttggcgttg
atggattgccaaagtgaagcgcgtctcgttcagtgcgtcgtaaaagcgagttgtaccgta
catgatgatgatgatactgatgatgatgatactgatgatggtgaacgcgaaggagagaat
gttgaaaagaagaagaagaagaagaagaagaataacttttacgttccaccgaaaaaagaa
accactgggaactccgcggcgaccaaacgcgtcgcgttcgaagacttgatgagagcgaca
acggcgacggtaaaaaagaagaagaatagtacttgtagatga
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