Bathycoccus prasinos: Bathy10g03440
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Entry
Bathy10g03440 CDS
T03089
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03030
DNA replication
bpg03410
Base excision repair
bpg03420
Nucleotide excision repair
bpg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bathy10g03440
03410 Base excision repair
Bathy10g03440
03420 Nucleotide excision repair
Bathy10g03440
03430 Mismatch repair
Bathy10g03440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpg03032
]
Bathy10g03440
03036 Chromosome and associated proteins [BR:
bpg03036
]
Bathy10g03440
03400 DNA repair and recombination proteins [BR:
bpg03400
]
Bathy10g03440
DNA replication proteins [BR:
bpg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
Bathy10g03440
DNA Replication Termination Factors
ELG1-RFC complex
Bathy10g03440
Chromosome and associated proteins [BR:
bpg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
Bathy10g03440
DNA repair and recombination proteins [BR:
bpg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
Bathy10g03440
Check point factors
HRAD17(Rad24)-RFC complex
Bathy10g03440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
Rad17
RuvB_N
RCF1-5-like_lid
AAA_22
Mg_chelatase
ResIII
AAA_16
AAA_11
DEAD
AAA_assoc_2
AAA_14
AAA_24
AAA_5
AAA_30
nSTAND3
SLFN-g3_helicase
AAA_19
RNA_helicase
AAA_2
ABC_tran
AAA_7
PhoH
TIP49
ATPase_2
Cdc6_lid
AAA_28
NB-ARC
DUF815
AAA_23
AAA_25
Parvo_NS1
DNA_pol3_gamma3
Motif
Other DBs
NCBI-GeneID:
19013419
NCBI-ProteinID:
XP_007510703
UniProt:
K8EJN1
LinkDB
All DBs
Position
10:complement(644178..645230)
Genome browser
AA seq
350 aa
AA seq
DB search
MGGEEEQMDVDHQHHAHVQAKKKEPWVDKYRPKKVSDVAYQTEVVSALEKAMETHNLPHM
LFYGPPGTGKTTCALAICKQLYGPELGKKRVLELNASDERGISVVRGKIKSFASTTVGEG
VPGYPCPPYKILILDEADSMTNDAQSALRRMMETYSRVTRFFILCNYVSKIIDPISSRCA
KFRFKSLDGGTMHERINFIAKGENLQLAEGTLQALEHVSAGDMRKAITLLQSAASLFGPE
LTGDRIREVAGVIPDEKIEELLQLCVAGDSQKSQALAEDILKDGFPCLQILEQFGYYLAD
SDLLEDEMKAEICLKLGEVEKKLVDGADEWLQLSHCISIATIVCSTKPEK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgggcggagaagaagaacaaatggacgtcgatcaccaacaccacgcacacgtccaagcg
aagaagaaagaaccgtgggtggataaataccgaccgaagaaagtctcggacgtggcgtac
caaactgaagtcgtctccgcgttagagaaagcgatggagacgcacaatttaccgcacatg
ttattctacggcccgcctggaacggggaaaacgacctgcgcgttggctatttgtaaacaa
ctgtacggaccagagttggggaaaaaaagagtgctggaactaaacgcctcggacgaacga
gggatctcggtcgtgagagggaaaattaaatcgttcgcgtcgacgacggtaggcgaagga
gtgccgggatacccgtgtccgccgtataagattctgattttagacgaagcggattcgatg
acgaacgacgcgcagtcggcgctgcgacgaatgatggaaacgtactccagagtgacgcga
tttttcatcctgtgtaactacgtgagcaaaattatagacccgatttcttctcgatgcgca
aagtttcgatttaaatcgttagatggagggacaatgcacgagagaataaactttatcgcg
aaaggagaaaatttacagttggcggaagggacgttgcaagcgttagaacacgtatctgcg
ggggatatgcgtaaagcgattactcttttacaatccgcggcgtctttgtttggaccagaa
cttactggagatcgcattcgcgaagttgccggtgtgattccggatgagaaaatcgaagag
ttgttgcaactctgcgtggccggggattctcaaaaatcgcaggcgttagcggaggatatt
ttgaaagacgggtttccttgtttgcaaatcttagagcagtttgggtactatttggctgat
agtgacttgctcgaggacgagatgaaagctgaaatttgcttgaagctaggcgaagtggag
aagaaattggtagacggggcggacgagtggctgcagttgtcgcattgtatctcaattgcg
acgattgtctgctcgacgaaaccagaaaagtaa
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