KEGG   Bathycoccus prasinos: Bathy10g03440
Entry
Bathy10g03440     CDS       T03089                                 
Name
(RefSeq) hypothetical protein
  KO
K10755  replication factor C subunit 2/4
Organism
bpg  Bathycoccus prasinos
Pathway
bpg03030  DNA replication
bpg03410  Base excision repair
bpg03420  Nucleotide excision repair
bpg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bpg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Bathy10g03440
   03410 Base excision repair
    Bathy10g03440
   03420 Nucleotide excision repair
    Bathy10g03440
   03430 Mismatch repair
    Bathy10g03440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpg03032]
    Bathy10g03440
   03036 Chromosome and associated proteins [BR:bpg03036]
    Bathy10g03440
   03400 DNA repair and recombination proteins [BR:bpg03400]
    Bathy10g03440
DNA replication proteins [BR:bpg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    Bathy10g03440
  DNA Replication Termination Factors
   ELG1-RFC complex
    Bathy10g03440
Chromosome and associated proteins [BR:bpg03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    Bathy10g03440
DNA repair and recombination proteins [BR:bpg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     Bathy10g03440
  Check point factors
   HRAD17(Rad24)-RFC complex
    Bathy10g03440
SSDB
Motif
Pfam: AAA Rep_fac_C DNA_pol3_delta2 Rad17 RuvB_N RCF1-5-like_lid AAA_22 Mg_chelatase ResIII AAA_16 AAA_11 DEAD AAA_assoc_2 AAA_14 AAA_24 AAA_5 AAA_30 nSTAND3 SLFN-g3_helicase AAA_19 RNA_helicase AAA_2 ABC_tran AAA_7 PhoH TIP49 ATPase_2 Cdc6_lid AAA_28 NB-ARC DUF815 AAA_23 AAA_25 Parvo_NS1 DNA_pol3_gamma3
Other DBs
NCBI-GeneID: 19013419
NCBI-ProteinID: XP_007510703
UniProt: K8EJN1
LinkDB
Position
10:complement(644178..645230)
AA seq 350 aa
MGGEEEQMDVDHQHHAHVQAKKKEPWVDKYRPKKVSDVAYQTEVVSALEKAMETHNLPHM
LFYGPPGTGKTTCALAICKQLYGPELGKKRVLELNASDERGISVVRGKIKSFASTTVGEG
VPGYPCPPYKILILDEADSMTNDAQSALRRMMETYSRVTRFFILCNYVSKIIDPISSRCA
KFRFKSLDGGTMHERINFIAKGENLQLAEGTLQALEHVSAGDMRKAITLLQSAASLFGPE
LTGDRIREVAGVIPDEKIEELLQLCVAGDSQKSQALAEDILKDGFPCLQILEQFGYYLAD
SDLLEDEMKAEICLKLGEVEKKLVDGADEWLQLSHCISIATIVCSTKPEK
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgggcggagaagaagaacaaatggacgtcgatcaccaacaccacgcacacgtccaagcg
aagaagaaagaaccgtgggtggataaataccgaccgaagaaagtctcggacgtggcgtac
caaactgaagtcgtctccgcgttagagaaagcgatggagacgcacaatttaccgcacatg
ttattctacggcccgcctggaacggggaaaacgacctgcgcgttggctatttgtaaacaa
ctgtacggaccagagttggggaaaaaaagagtgctggaactaaacgcctcggacgaacga
gggatctcggtcgtgagagggaaaattaaatcgttcgcgtcgacgacggtaggcgaagga
gtgccgggatacccgtgtccgccgtataagattctgattttagacgaagcggattcgatg
acgaacgacgcgcagtcggcgctgcgacgaatgatggaaacgtactccagagtgacgcga
tttttcatcctgtgtaactacgtgagcaaaattatagacccgatttcttctcgatgcgca
aagtttcgatttaaatcgttagatggagggacaatgcacgagagaataaactttatcgcg
aaaggagaaaatttacagttggcggaagggacgttgcaagcgttagaacacgtatctgcg
ggggatatgcgtaaagcgattactcttttacaatccgcggcgtctttgtttggaccagaa
cttactggagatcgcattcgcgaagttgccggtgtgattccggatgagaaaatcgaagag
ttgttgcaactctgcgtggccggggattctcaaaaatcgcaggcgttagcggaggatatt
ttgaaagacgggtttccttgtttgcaaatcttagagcagtttgggtactatttggctgat
agtgacttgctcgaggacgagatgaaagctgaaatttgcttgaagctaggcgaagtggag
aagaaattggtagacggggcggacgagtggctgcagttgtcgcattgtatctcaattgcg
acgattgtctgctcgacgaaaccagaaaagtaa

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