Bathycoccus prasinos: Bathy11g00430
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Entry
Bathy11g00430 CDS
T03089
Name
(RefSeq) hypothetical protein
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
bpg
Bathycoccus prasinos
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpg03041
]
Bathy11g00430
03009 Ribosome biogenesis [BR:
bpg03009
]
Bathy11g00430
Enzymes [BR:
bpg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Bathy11g00430
Spliceosome [BR:
bpg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
Bathy11g00430
Ribosome biogenesis [BR:
bpg03009
]
Eukaryotic type
90S particles
Helicases
Bathy11g00430
Pre-60S particles
Bathy11g00430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Nop14
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
19012729
NCBI-ProteinID:
XP_007510240
UniProt:
K8F1A2
LinkDB
All DBs
Position
11:complement(73804..75588)
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AA seq
594 aa
AA seq
DB search
MTKEEKREKKKRREMEGGEGEEKDNDEDKELRKKKKKKKKKSEKKEGGGGKEEEEEEEEE
EEEEKEGRKDGKRDKTSSLPKPGDKNHVVVQVDGILSSATFASLDLSNPTMQGIKELGHE
KMTEVQARCIPPLLAGRDVLGAARTGSGKTLAFLIPCCELLYHAKFMPRNGCGVMVLSPT
RELAMQIYSVAQQLMQKHSQTHGLLMGGANRRAEGEKLIKGVNLLVATPGRLLDHMQNTR
GFQYSSLKVFVMDEADRMLDIGFEEEMRTIVKMLPKDRQSMLFSATQTTKVEDLARLSLK
TPLYIGVDDSRAVSTASGVEQGYCVVPSEKRFLLLFTFLKKNLKKKVMVFFSSCNSVKYH
AELLNYIDIPVSDIHGKQKQQRRTTTFFEFCKADRGILLCTDVAARGLDIPDVDWIIQYD
PPDDPKEYIHRVGRTARGTDGRGRALLFLIPGELGFLKYLKNAKVPLNEYEFPQKKIANV
QSQLEKLVEKNYYLHTSAKDAYRAYILAYNSHTLKDVYNVHALDLAAVGLSFGFSRPPKV
QLNLESKASKGRGKVSNGAPGSDYRRQKGTGHGFSANNPYGKKDSGDSRQFIRG
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaggaggagaagagagaaaagaagaaacggcgcgagatggaaggaggagaaggg
gaagagaaagacaacgacgaggacaaagaattaaggaagaagaagaagaagaagaagaag
aaaagtgagaaaaaggaaggcggcggcgggaaagaagaagaagaggaagaagaagaagaa
gaagaagaagaaaaagaaggacgcaaagacggtaagagagataaaacaagctcactgccg
aaacctggagacaaaaatcacgtcgtcgtgcaagttgatggtattctctcctccgcgacg
tttgcgagtttggacttgtccaatccgacgatgcaaggcatcaaagaattgggacacgag
aagatgacagaggtgcaagcgaggtgtattcctcctttgttagctggacgagacgtgctc
ggtgcggcgagaactggctctggcaaaactttggcatttttaattccttgttgcgaactt
ctgtaccacgctaagtttatgcccagaaacggatgcggagtgatggttctctcgcccact
cgcgaactggctatgcaaatctacagcgtcgcgcaacaactcatgcaaaaacattctcaa
acccacggattattgatgggtggagccaatcgacgagcggaaggtgaaaaattaattaaa
ggagtaaacctcctcgtcgccacgccaggcagattactcgatcacatgcagaatactcgt
ggtttccaatacagttcgttgaaagtcttcgtcatggacgaagcagaccgtatgctcgat
attggttttgaggaggagatgcgtacgattgtaaaaatgcttccaaaagatcgccaatcg
atgttattttccgcgacacaaaccacgaaagtcgaagatttagcacgtttaagtttgaaa
acgcctttatacattggagttgatgattctagagccgtttctactgcttccggagttgag
caaggttactgtgtcgttccgtctgagaagcgctttttgctcttgtttacatttttaaag
aaaaatttgaagaaaaaggtgatggttttcttttcatcctgtaattcggtcaaatatcac
gcggaattattgaactacatagacatcccggtttccgatatacacggtaaacagaagcag
cagaggagaacaaccacattttttgagttttgcaaagccgatcgaggtatcttgttgtgc
accgatgttgctgcgagaggattagatattccagatgttgattggataatacaatacgat
ccaccagatgatccgaaagagtatattcacagggttggacgaactgctcgaggaaccgac
ggaagagggcgcgctctgttattcctcattccaggggaactcggatttttgaaatatctc
aagaacgcaaaagtacctctgaatgaatacgaattcccgcagaagaaaatagctaatgta
caatcgcagcttgaaaagttggtcgagaaaaactattatttgcacacatcagcaaaagat
gcatacagggcgtacattttagcgtacaactcgcacactctgaaagatgtgtacaacgtt
catgctctcgatttggcagccgtaggcttatcctttggcttcagccgccctccaaaagtg
cagctgaatttagaatcaaaagcaagtaaaggtaggggtaaagtatcaaatggtgcgcct
ggtagtgattacagaaggcaaaaaggtactggccatggttttagtgcgaataatccgtac
gggaagaaggattcgggagactcgagacagttcattcgaggataa
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