KEGG   Bathycoccus prasinos: Bathy11g01060
Entry
Bathy11g01060     CDS       T03089                                 
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
bpg  Bathycoccus prasinos
Pathway
bpg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bpg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Bathy11g01060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bpg03041]
    Bathy11g01060
Spliceosome [BR:bpg03041]
 Complex C
  Other components
   Step II factors
    Bathy11g01060
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_RIG_2nd EIF3I Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_CAF1B_HIR1 WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_NOL10_N Beta-prop_IFT140_1st WD_LRWD1 NBCH_WD40 Beta-prop_DCAF4 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 19012786
NCBI-ProteinID: XP_007510138
UniProt: K8FA55
LinkDB
Position
11:187849..189888
AA seq 679 aa
MEAFLPAANYASSSSSEEEEDLKEGRGEEAGFSERKSSVRVVNIDPAPNVNVANLALTKE
DARKSSSLGIDDFEAAAKRGGKALSSSASRSVVKVVPKSAVAKNANEEEFLQPNAQVLTT
NLTYEQMSAKVEGPEHPNLKRRDERRARNHHMGFVQTLNVDSFAFDAQYNTQMQAQQQLQ
REQQIARGEGRKLSGKTATTTTTNTNTNTNWNAKTVYDMTKKERRERRNETLMEAAASFN
VIGGDGNEDDGTGNANGAWAKSPGAKLDVMKKSELSREQKEYLEWHAKRNDAKRKARGKL
GDAGRDDDDVVAAAAGKNKNKEGDDEEVDEVELKRRQQAAKTKFHGEEEFKYDGSSWLAK
PKTLKARSDRCYAPEKTTKQWIAHGKGVSHLEFFPNSGHVLLTCGMEGVAKIWDSGDEKN
KFKLLRSYSGHAKAIKSGCFTPNDGSRFATCGWDQRIHLWDTETGAVVRTVSSGKTPLCL
AFHPQKSNILLVGQSDKKIVQYDMQSGDVVQEYDQHLGGVNSIAFCDGGKRFASTSDDKT
LRAWEFGIPVTMKYVADPLMHSMPSTKMHPDGDYLACQSLDNSIKIYSTKDRFREKRNKS
FMGHQNAGFACEIAFSPDNGKYMASGDGDGRLFFWDFKTGRKVKTFKAHDKVCITLDWHP
LLASRVCTGSWDGKVKIWD
NT seq 2040 nt   +upstreamnt  +downstreamnt
atggaagcttttttaccggcggcgaattacgcgagttcttcttcatcggaggaggaggag
gatttgaaagagggaagaggagaagaagcgggctttagtgagaggaaaagtagtgttcgt
gttgttaacatcgatccggcgccgaacgtgaacgtggcgaacttggcgttgacgaaagaa
gacgcgcgaaagtcgtcgtctctcgggattgatgattttgaagcggcggcgaaaagagga
ggcaaagcgctttcttcgtccgcttcgaggtctgtggtaaaagtcgttccgaaatcggcg
gtcgccaaaaacgcgaacgaggaggaattcttacaaccgaacgcgcaggttttgacgacg
aatttaacgtacgagcagatgagcgcgaaagtggaaggtccggagcatccaaacttgaag
cgacgggacgagaggagagcgaggaaccatcacatgggtttcgtgcagacattgaacgtg
gattcgttcgcgtttgacgcgcaatataacacgcaaatgcaagcgcagcagcaactgcaa
cgagaacagcagattgcgagaggagaaggtcgaaagctgagcgggaaaactgcgacgacg
acgacgacgaatacgaatacgaatactaactggaacgcgaagacggtgtacgacatgacg
aaaaaagaacgccgagaaagacgaaacgaaacgttgatggaagcggcagcctctttcaac
gttattggcggcgatggtaacgaggacgatgggactgggaatgcgaacggcgcgtgggct
aaaagtccaggggcaaaactagacgtgatgaaaaaatccgaactttctcgagaacagaaa
gaatacttggaatggcacgcgaaacgcaacgacgcgaaacgaaaagcgagaggtaaatta
ggggacgcgggaagagacgacgatgacgtggtagccgctgccgctggaaagaataaaaat
aaagagggggacgacgaagaagtggacgaagttgagttgaaaagaagacagcaagcggcc
aagaccaagttccacggagaagaagaattcaaatacgacggatcttcgtggttggcgaaa
ccaaaaacgttaaaagctcgaagcgatagatgttacgcgcccgagaaaacgacgaaacaa
tggattgcacacggtaaaggcgtttctcatctcgaatttttcccgaattcgggtcacgtt
ttgctcacgtgcgggatggaaggcgtcgcgaaaatatgggactctggcgatgaaaagaat
aagtttaagcttctcagatcgtacagtggtcacgcgaaagcaattaaatcggggtgcttt
actccgaacgatggatcgaggtttgccacgtgcggttgggatcaaaggatacatctctgg
gatacggaaaccggagcggtagtgcgcacggtctcctccgggaaaacgcctctgtgttta
gctttccatccgcaaaagtccaacattttactcgtcggtcagagcgataaaaaaatagtg
caatacgacatgcaatccggggatgtcgttcaagaatacgatcagcacttgggtggagtg
aactcgattgctttttgcgacggagggaaacgcttcgcgtcgacttcggacgacaagacg
ctcagagcttgggagtttggcattccggtgacgatgaaatacgtcgcagatcctttgatg
cactcgatgccatcgactaaaatgcacccggacggcgattatttagcctgccaatcttta
gataactcgatcaaaatttatagcacaaaagatcggttccgagaaaaaaggaacaagtcg
ttcatggggcatcaaaacgccggattcgcgtgtgaaattgctttttctccggacaatggt
aaatacatggcgagtggggacggcgacggacgcctattcttttgggacttcaagacaggg
cgaaaagtgaaaacatttaaagctcacgataaggtttgcatcactttagactggcatccg
ctgttagcatccagggtttgcacaggatcttgggacgggaaggttaagatttgggattga

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