Bathycoccus prasinos: Bathy11g03520
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Entry
Bathy11g03520 CDS
T03089
Name
(RefSeq) hypothetical protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03022
Basal transcription factors
bpg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Bathy11g03520
09124 Replication and repair
03420 Nucleotide excision repair
Bathy11g03520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpg03021
]
Bathy11g03520
03400 DNA repair and recombination proteins [BR:
bpg03400
]
Bathy11g03520
Transcription machinery [BR:
bpg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Bathy11g03520
DNA repair and recombination proteins [BR:
bpg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Bathy11g03520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
LYRIC
Motif
Other DBs
NCBI-GeneID:
19013031
NCBI-ProteinID:
XP_007510279
UniProt:
K8EKW8
LinkDB
All DBs
Position
11:complement(join(660130..660144,660177..661556))
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AA seq
464 aa
AA seq
DB search
MTGCSFSQSSSKYSSGSSQSAFVEFFAHLSEEKINHLYTISPWATLAVLRALTPLAKQYI
MRCVFLPLHSVIAHEMLASWTKRGCETAHEMAIERLVQLRAFVEVESHSSEEEGKKEENA
SKGGGFIVHEHFRKHVKRAIERGFEDLDDEEEEEKENEGEKKKKKKANVKTTNTTSTTTT
RFNEEDAGFLDHYAKSRWETVLLELTSEASVEKKRKKKKMMKKKGDGGAGAQHALHLRKL
FYAARLITKDGRITSEGFSFLLGATSEQIWILLARYARGGDFEKKMKNKTTNEENGEGDK
METNGEDEKQQHKLKSDESSAAAMAFLVRLSFQHPGRKYSKANLSEAERRVASHLSALGV
LYENEDDENDNNWYVPTVLSAGLSSVSTTSSAKSALARIDGHIIVETNFRVYAYTHSELE
TEVLRLFTRPDYKLPNAYVGMITRDSILDAMRAGISPDQIVYDR
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgacgggttgttcgttttctcaatcatcctcgaaatactcgtcggggtcatctcagtca
gcgttcgtggagttcttcgcgcacttatccgaggagaaaatcaaccacttgtatacgatt
tccccgtgggcgaccttggcggtgttacgagcgttgacgccgttggcgaaacaatacatc
atgcgatgcgtgtttttaccgttacactctgtgatcgcgcacgaaatgctcgcctcgtgg
acgaagagagggtgcgaaacagcgcacgagatggcgattgaaaggttggtgcagctcaga
gcgttcgtggaagttgaatcgcactcttcagaagaagaagggaagaaggaggaaaacgct
tccaaaggaggagggtttatcgtccacgaacacttccggaaacacgtgaaacgagcaatc
gagagaggtttcgaggatttagacgacgaagaagaagaagagaaagaaaacgaaggagaa
aagaagaagaagaagaaggcgaacgtaaaaacgacgaatactacatctaccacaaccact
cggtttaatgaagaagatgcggggtttttagatcactacgcgaagagtcgatgggagacg
gtgttgctcgagttgacgtccgaggcgtccgtggagaagaagagaaagaagaagaagatg
atgaagaagaaaggagacggcggcgcgggggcgcaacacgctctgcacttgcgaaagttg
ttctacgcggcgagactgattacgaaagatggacgaattacgagcgagggattctcgttt
ctgttaggcgcgacgtcggagcagatttggatcttattggcgaggtacgcgagaggcgga
gatttcgagaagaagatgaagaataaaacaacaaacgaagaaaacggcgagggcgacaag
atggaaacgaatggagaagatgaaaagcaacaacacaaactcaagagcgacgaatcatcc
gccgctgccatggcgtttttagttcgactttcgtttcaacacccggggcgcaaatattcc
aaagcgaatctctccgaggcggaaagacgcgtggcgagtcatttaagcgctttaggcgtt
ttatacgaaaatgaagacgatgaaaacgacaacaactggtacgtgcctaccgttttatcg
gctggtttatcgagcgtttcgacgacgtcttcggcgaaatcggcgttagcgcgcatcgac
ggacacatcatcgtggagacgaatttcagagtgtacgcgtacacacactctgaactagaa
acggaagttttacgtctattcactcgaccggattacaaacttccaaacgcgtacgtcggt
atgattacgcgagattctattctagacgccatgcgtgccggtatatcgcccgatcaaatc
gtgtacgatcggtaa
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