Bathycoccus prasinos: Bathy11g03760
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Entry
Bathy11g03760 CDS
T03089
Name
(RefSeq) hypothetical protein
KO
K10610
DNA damage-binding protein 1
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03420
Nucleotide excision repair
bpg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
Bathy11g03760
09124 Replication and repair
03420 Nucleotide excision repair
Bathy11g03760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bpg04121
]
Bathy11g03760
03400 DNA repair and recombination proteins [BR:
bpg03400
]
Bathy11g03760
Ubiquitin system [BR:
bpg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
Bathy11g03760
DNA repair and recombination proteins [BR:
bpg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
Bathy11g03760
TCR (transcription coupled repair) factors
Cul4-CSA complex
Bathy11g03760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_ELP1_2nd
PRC2_EED_ins
Motif
Other DBs
NCBI-GeneID:
19013055
NCBI-ProteinID:
XP_007510182
UniProt:
K8EJZ1
LinkDB
All DBs
Position
11:complement(701703..705530)
Genome browser
AA seq
1275 aa
AA seq
DB search
MDASEKEGLQHHSSPSSSSLPSTEVFNYVVTAHKPTAVSYSCVGHFTHLERQNLIVARSN
RIEIYLLTEEGLEPVLETTVYGRIAMLKLCEGRKNGDRENIPGRLVVVTEDRYSLAVLSY
DAATNTLRTVSSGDVSDLTGRPVEHGMLGDIDRNARVIALHIYDGLIKFIPFDENGNLLQ
AFNANLNELKVLDFVFLPSTSSSTSGIAIDASEYGNNNNNNNNNNASDMNITLSNVSSLT
RSINRENAGGGGLSSMPVIAVLHKDVKDERHVSTYRVNLRDRDLEPGPFEQREVEIGSKK
LLALSSPIGGCVVVGEETIAYLNEPAGIMDDHENNNNKNNNTATKNATSTLSNNANSNVM
FRGENKSSTSALVRAITTPDLLMFSSACLIPSDENVSNQLVDRFLIADEDGDLYLLMLSK
GTTSTMSTSIVSKLTIERLGKTSSASAMSYLDNSVVFIGSAYGDSQIIKLHTEQVNTMMS
ASNELPSYVEVLEEFTNLGPIVDFCVMDLERHGQGQLVTCSGVGTSGSLRVIRNGIGIRE
QAQISLSGIKGLYSCKRDETMPLDSYLIVSFIAETRILAINDNDELEEAVFPGFDASSQT
IECANISGNVICQVTSKGVYVCDASSGELVASWVPSDESPITASSASENTIAVATVGGNL
HYLSFQGGKISETGKMTFDAEISCIDKTQCGDRNVCAVGLWSTKVLLVELGSGMKVCHTE
NLSLDVVPRSTLFCFFEDTIYLLTGLGDGHLITNVVDSSSSAGGFALSDRKSVSLGTQPV
TLKLFKSQHSMHVFAGSDRPTIIYSNSKKLVYSNVNLNEVLHVAPFNCDAFPDALALASG
EHLTIGAVDDIQKLHIRTVPLREQPRRIAHQPETKTLAVLTMKESDVPGQEEEFFVRLFD
NKTFETLAKYPLEPNENDASIISCSFDGDDDIYFVVGTAFADPHSEPESSRGRILVFKVS
NTSSSGGGNAVVNGNDHGDGRASASSSVLQKSLTLVCEKETRGAVYNLNAFCGKLLAGIN
SLVKLFNWGVSKENKRELVHECSHMGHIIALKVETKDNLIVVGDLMKSITLLQYQRESGR
IEEVAHDFSSNWMTAVEILDDNTYLGAESSYNLFTVQRNADADTEDKRGTLELCGAFHLG
DSVNRFRRGSLVMRMPDLSDDTSSLSEISTWLFGTISGGLGVVATLPKRDFMLLNKVQEA
MQKVVTGVGNFSHSDFRSFHNVQRSVEMRNFIDGDLVEIFLDLSKEDQVAVSELSGVSNS
EDLVKKIEEISRLTH
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgtcggagaaagaaggacttcaacatcattcatcgccttcttcctcatcccta
ccctcgactgaagtctttaattacgtcgtcaccgcgcataaaccgacggctgtatcctat
tcatgcgtgggacatttcacgcatttggagagacaaaatttgatagttgcacgatccaat
cggattgagatttatctcttgaccgaagaaggattagaaccagttctggagacgacggtt
tatggacgcatcgctatgcttaagctgtgcgaaggaagaaaaaatggtgacagagaaaac
ataccaggtcgtctcgtcgtcgttacggaagaccgatactcgctcgccgttttgtcgtac
gatgcggcaaccaacacgcttcgaacggtttcgagtggcgatgtttccgatttgactgga
cgaccagtcgaacacggcatgctcggcgatatcgatcgaaatgccagggttatcgcttta
cacatttacgatggtttaataaaatttattccgttcgatgagaacggaaacttgttacaa
gcgttcaacgccaacctgaacgaactcaaagttttggatttcgtttttcttccgtcgacg
tcatcgtcgacatctgggatcgcaatagacgcgagtgaatacggtaataataataataat
aataataacaacaacgcatcggacatgaatataacattgtcgaacgtttcgagcttgacg
aggagtatcaatcgggaaaacgctgggggcggcggtttgagttcaatgccagtcatagcg
gttttacataaagacgtgaaggacgaacggcacgtctcgacttatcgcgtaaacttacgt
gatagagatttagaaccaggtccatttgaacagcgcgaagttgaaataggctcaaagaaa
ctgcttgctttatcctctcccattggaggttgcgtggtcgttggcgaagaaacgattgcg
tatttaaatgaacccgcgggaataatggatgaccacgaaaacaacaacaacaagaataac
aacaccgcaacgaagaatgctacaagtacgttgagcaataatgcaaacagtaatgtcatg
tttcgcggcgagaacaagtcgtctacgtcggctttagtacgagctattactactccagat
ttgctcatgttttcttcagcgtgtctgattccttcggacgagaatgtttcgaaccagctc
gtcgatagatttctaatcgcggacgaagacggcgatttgtacctgttgatgctgagcaaa
ggcacgacatcgacgatgagcacttccattgtttcgaagttgacgatagaaaggttaggt
aaaacgtcctcggcatctgcaatgagttatctcgacaacagtgtggttttcattggaagc
gcgtatggagattcccaaataattaaactgcacacggaacaagtcaataccatgatgtca
gcttcgaacgaactaccaagctacgtcgaagttttggaggagtttaccaatcttggtcct
atcgtagacttttgcgtcatggatttagagcgtcacggtcaaggtcaactcgtcacgtgt
tcgggggtaggcacgagcggatctttacgcgttattcggaatggaatcggaatccgagaa
caggctcagatttcactctcagggattaaaggtctctactcgtgcaagcgggacgaaacg
atgcctttggattcctatttgattgtgtcgttcatcgcggagacgcggatattagcaata
aacgataacgacgagttggaagaggcagtgttcccaggatttgacgcatcttcccaaacg
attgaatgtgcaaatatttctggaaatgtgatctgtcaagtcacaagtaaaggcgtttac
gtttgcgatgcttcgtcgggagaacttgtcgcttcatgggtgccgtctgacgagagtcct
ataactgccagttcagcgtcagagaataccatagccgtcgccactgtcggtggtaatctt
cattacctttcttttcaaggtgggaagatttcagagactggaaaaatgactttcgatgct
gaaatatcttgcatcgataaaacgcagtgcggcgatcgtaacgtctgtgcggttggattg
tggagcacgaaggttttgctggtcgaattaggatcggggatgaaagtctgtcacacagaa
aatttatctctcgatgtcgttccaaggtcgacgttattttgcttcttcgaagatacaatc
tatttactcaccggtctcggtgacgggcacttaataacaaacgtcgtcgattcttcgagc
tcagccggaggatttgcgttgagtgatcgaaaatctgtttcccttggcacgcaaccggtt
actctgaaattattcaagtctcagcattcaatgcatgtcttcgcgggatcggatcggccg
acgattatatattccaacagtaagaagctcgtctactcaaacgtgaacttgaacgaggtt
ttgcacgtggcaccgtttaattgtgacgcttttccggatgcgctagctttagccagcggc
gaacatttgacgattggtgccgtcgatgatattcagaaattgcacattcgtacggttccg
ctgcgcgaacaacctcgtagaattgcgcatcaaccggaaacaaaaactttagcggtgctt
accatgaaagagagcgatgttcctgggcaagaagaagagtttttcgtgcgattattcgac
aataaaacttttgaaactttggcaaaatatcccctcgaaccgaacgagaacgatgcaagt
attatttcgtgttctttcgacggggacgacgatatatatttcgttgtcggaacggctttt
gcggaccctcattcggagcctgaatcttctcgaggacgcatactcgttttcaaagtttcg
aacacatcgtcgagtggcggtggaaacgctgttgtcaacgggaatgaccacggcgacggc
cgcgcttccgcgtcctcgtctgtgcttcaaaagagtctcacgctcgtctgtgaaaaagaa
acccggggtgcggtgtacaatttgaatgccttttgcggtaagctactcgccggtatcaat
tctctggtgaaattattcaactggggcgtttccaaagaaaataaacgcgagttagtgcac
gagtgttctcacatgggacacatcatcgcactcaaggttgaaacgaaagataatttgatc
gtcgttggtgatttgatgaagtcgataacgctgctgcagtatcagcgagaatccggcagg
attgaagaagtcgcgcacgattttagctcgaattggatgacggcggtcgagattttagac
gataacacatatctcggagctgaatctagttacaacttgtttaccgttcagcggaacgcg
gacgcagacacagaagataaacgcgggacgctagagctttgtggcgccttccacttggga
gattccgtgaatagattcagacgcggtagtctggtcatgcgcatgccagatctaagcgac
gatacgagctccttgtctgaaatctccacttggctatttggcacgatctctggtggttta
ggcgtcgttgcgactttaccgaaacgcgatttcatgttacttaacaaagttcaagaagcc
atgcaaaaggtagttaccggagtgggaaactttagtcactctgacttcagaagttttcac
aacgtgcagcgaagcgtagagatgcgaaactttatcgacggtgatttggtcgaaatcttc
ttagatctatccaaagaagaccaagtcgcggtgtctgaactgtctggagtttcgaattcc
gaggacttggtaaagaagattgaagaaatttctcgtcttacgcactaa
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integrated database retrieval system
