Bathycoccus prasinos: Bathy12g00560
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Entry
Bathy12g00560 CDS
T03089
Name
(RefSeq) hypothetical protein
KO
K12584
m7GpppX diphosphatase [EC:
3.6.1.59
]
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bathy12g00560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpg03019
]
Bathy12g00560
Enzymes [BR:
bpg01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.59 5'-(N7-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase
Bathy12g00560
Messenger RNA biogenesis [BR:
bpg03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
Bathy12g00560
3'-5' decay
Other 3'-5' decay factors
Bathy12g00560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
DUF5486
Motif
Other DBs
NCBI-GeneID:
19012360
NCBI-ProteinID:
XP_007510014
UniProt:
K8EMC5
LinkDB
All DBs
Position
12:109996..111063
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AA seq
355 aa
AA seq
DB search
MTTVKVPEKLQTLRGFKVSKILNDGKDSSSFGNVVALLGTFPGLMEEEEEESVVLKLSRP
PIPLDDLDQLADAITLYERMPYSGMEYGYYHGVVNNSSETFFAPYVSVDVLYPGCLKDES
KEAKAKLLAKHISRNQAQRPVIFRENPKTYENAHLPYIEAIPSSAIGWVHKILNKEKELE
RLLFDDDDVNDGFLLNTDPKWTTHPDPKTTPKEQWMNHPSTRELYCLGLCHRKDVRSLRD
LRAAHLPMLRAMAKKGREVIKNTYGLANESLRIFVHYPPQFYHFHVHFTNVSVEHGVSAE
RAHLLDDVIENIERDSEHYAKRSITCRMGENDELWRRFKELDDKAGAEAADDDAR
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgacaacggtaaaagtaccggagaaactccaaaccttgcgagggttcaaagtttcgaaa
attctcaacgatggcaaggactcctcgagctttggcaacgtcgtcgcgttgttaggcacc
ttccctggattgatggaagaagaagaagaagaatctgtcgttctgaagctttctcgaccg
ccgataccgttggacgatttagaccaactcgcggacgcgataacgctttacgaacgcatg
ccgtactcagggatggagtacgggtactaccacggcgtcgtgaacaattcatccgagacg
tttttcgccccgtatgtgtccgtggacgtcttataccccgggtgtttgaaagatgaatca
aaagaagcaaaagcgaagctcctggcgaaacatataagccgcaaccaagcgcagagaccg
gtaatcttccgcgagaacccaaaaacgtacgaaaatgcgcatttgccgtacatcgaggcg
atcccgtcaagtgcgatagggtgggtgcacaagattttgaacaaagagaaagaactcgaa
cgattgctcttcgacgacgacgacgtgaacgacgggtttctcttgaacacggatccgaag
tggacgacgcaccctgacccgaagacgacgccgaaagaacagtggatgaaccatccttca
acgcgcgagctgtactgtctcggattgtgtcacagaaaagacgtgcggtcgctgcgggac
ttaagagcggcgcacctgccgatgttacgcgccatggcgaaaaagggcagggaggtgatc
aaaaacacgtacgggctcgccaacgagagcttgaggatattcgtgcactacccgccgcag
ttttatcactttcacgtccacttcacgaacgtgtctgtggaacacggcgtcagcgccgag
cgcgcgcaccttctcgacgacgtgattgaaaacatcgaacgagactctgagcactacgcg
aagcgctccatcacgtgccgcatgggcgagaacgacgaactgtggaggcggttcaaggaa
ttagatgataaagcgggggcagaggcagcggacgacgacgcgagatag
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