Bathycoccus prasinos: Bathy12g00950
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Entry
Bathy12g00950 CDS
T03089
Name
(RefSeq) hypothetical protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
bpg
Bathycoccus prasinos
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpg03009
]
Bathy12g00950
Enzymes [BR:
bpg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Bathy12g00950
Ribosome biogenesis [BR:
bpg03009
]
Eukaryotic type
Pre-60S particles
Helicases
Bathy12g00950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
19012340
NCBI-ProteinID:
XP_007509862
UniProt:
K8EL89
LinkDB
All DBs
Position
12:179207..181549
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AA seq
780 aa
AA seq
DB search
MAPPPLSSRSVAEGPPFEELEPPLRAQTLSILKSLAFVNSTPVQAAVIGLLGKNKDVSVE
ACTGSGKTLAFVLPMIEILWKANKESKFKKHSIGAVIVSPTRELARQIRDVAEPFLESLR
AIADEEDEESKEHSKFNPDVKPMLLVGGGAQTVADDLKRFSERGSLCLIGTPGRMLDVLT
KARDLDAKRCELLVLDEADRVLGMGFAKTLNSIIGMLPKQRRTGLFSATQTEELEELARA
GLRNPVRVTVRDSNAAAAAAAAGGGKENKTDKKKGAIGAGAGSKLPMQLELSYRICETVD
AKIFRLAEFLKAKKGRKIIVYFLTCACVDYYQKALDALLDVGSGSKKNNNNNNSSSNKKK
KTTKNGNDSRIEIFALHGKMKQAQREQTLENFAENKENDEENGVESSILLTTDVAARGLD
IPGVDWIVQFDMPQDPSAFTHRVGRTARMGAKGSALALLTKEESSYVAFLKIRGVHLRRD
GNCRFADGDNGDGEEEEEEEDLDAVVEEDANGAREVYDTLRALSKRDREAMEKGVRAFVS
YVRGYKEHHCRFIFRLKELHLAKLANAMGLLRLPKMKEIRKAAKNTLEGFEECVDVNIEE
IPYLDLQREKQRKIQLEKDREEKEARGEEEDDDDARRKKESRGNNERKKENKPEKKLTAH
KRRQIETREELDELDDDYRALKKWKKGKISEEEFEFELGWDENPNQAGKVRIKEGEKDEN
NFLAHPSSSGKQQQRKEDFYRNGDDLWMKEKKKPKHVKQSKGGQGKKYQKARDRAAAKAK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcctcctctttcttctcggtcagtcgccgaaggcccgccgttcgaagaatta
gaacctcctctgcgggcacaaaccttatctattctcaaatctctcgcgttcgtaaattcc
actccggtgcaagccgccgtcattggtttactcgggaaaaacaaagacgtgagcgtggaa
gcgtgcacgggatcggggaaaacgctcgcgttcgtgttaccgatgattgagatattgtgg
aaggcgaacaaggagagcaagtttaagaaacactcaatcggggcggtgatcgtatcgccg
acgagagagctggcgaggcaaattcgagacgtggcggagccgtttttagagagtttaagg
gcaatagcggacgaagaggacgaggaaagcaaagaacactcgaaatttaatccggacgtt
aaaccaatgctgttagtcggtggaggcgcacaaactgtcgcggacgatctcaaacggttc
agcgaacgagggtcgctgtgtttaatcggcacgcccgggcggatgttggacgtgttgacg
aaagcgagagatttagacgcgaagaggtgcgagttattggtgttggacgaggcagacaga
gttttaggtatgggcttcgcgaaaactctgaactcgattattgggatgttgccgaaacag
agaagaactgggttgttttcggcgacgcagacggaggagttggaggagttggcgagagcc
gggttgcggaatccagtccgggtgacggtgagagattcaaacgcggcagcggcggcagca
gcagcgggtggaggaaaggaaaataaaacagataagaagaaaggagcgataggagctggt
gcggggagtaaattgccgatgcagttggaattgtcgtatagaatttgcgaaaccgtcgac
gccaagattttccgattagcggaatttttaaaggcgaagaaagggaggaagatcattgtg
tatttcctcacgtgcgcgtgcgtggattactatcagaaagctttggatgcgcttttagat
gtcggtagtggtagtaaaaagaataataataataacaatagtagtagcaataagaagaag
aaaacgacgaaaaatggcaacgacagtagaatagaaattttcgctttacacggcaaaatg
aagcaggcgcagcgagagcaaactttagagaatttcgcggagaataaagagaacgatgaa
gaaaacggcgttgaatcatccattttgctcacaacagacgttgccgcgagaggtttagat
attcccggcgtcgattggatcgtccagtttgatatgccgcaagatccgtccgcgtttact
cacagagttggaagaaccgctcgaatgggcgcaaaaggtagcgccttggcgttattgacg
aaagaggaaagctcatacgtagcattcttgaaaattagaggcgttcatttacgcagagat
ggtaattgcagattcgcggatggcgataacggcgatggcgaagaagaagaagaagaagag
gatttggatgcagtcgtagaagaagacgcaaacggcgcgagagaagtgtacgacacgctt
cgagcgctctctaaacgcgatcgcgaagcgatggaaaaaggcgtcagagctttcgtatcg
tacgttcgagggtataaagaacaccactgtcgatttatctttcgcttgaaagagctacac
ttggcaaaattagcaaacgccatgggacttttgcgtttaccgaagatgaaggaaattcgc
aaagcggcgaagaatacgctcgaaggattcgaagagtgcgtcgatgtcaacatcgaagag
attccgtacttggatcttcagagagaaaaacagcgcaaaatacagctcgaaaaagatcgc
gaggagaaggaagcgcgaggagaggaagaagacgacgacgacgctcgaaggaagaaggag
agtcgcggaaataacgaaaggaaaaaagagaataaaccagaaaagaagctcaccgcgcac
aaacgtcgtcaaatcgaaacgcgagaggaattagacgaactagacgacgattacagagct
ctgaaaaagtggaagaagggcaaaatttccgaagaggagtttgaatttgagctcggatgg
gacgagaaccccaaccaagccgggaaagtcagaatcaaagaaggcgagaaagacgagaat
aactttttagcgcatccttcgtcttccggaaagcaacagcagagaaaagaagacttttac
cgaaacggcgacgatttatggatgaaggagaagaaaaaacctaagcacgtgaaacaatcg
aaaggtggccaagggaagaagtatcagaaagcgagagatcgagcagccgcgaaagctaaa
taa
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