Bathycoccus prasinos: Bathy12g01060
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Entry
Bathy12g01060 CDS
T03089
Name
(RefSeq) hypothetical protein
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Bathy12g01060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpg03021
]
Bathy12g01060
Transcription machinery [BR:
bpg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
Bathy12g01060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
Tau95
AprA_N
Motif
Other DBs
NCBI-GeneID:
19012325
NCBI-ProteinID:
XP_007509761
UniProt:
K8ELF7
LinkDB
All DBs
Position
12:complement(202307..203437)
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AA seq
376 aa
AA seq
DB search
MDLEEFPPGSELVVSAMQKYLQKLNKLNALNECVHKLNPEKLEETAKKYSRSKKDKNAPE
WRPYATPYLLREHWRYQVCQKLNIDKKDLPEEVTEALRAYLFPSALDTQRANHRAWLVKV
PNFVDRAWKSFSDRRSKADNENDEDGMDIDAELNDNDELGKVRVVIDPFDKENKEAFAVT
LNAAVNEDEEHEIPVKYIMTENIEAPEIHVFSETREGTAAATSAMDVNEFIVEAKVHKKL
DMRPKDASDAAYARVSKNRLEKAQSKSRFVQSVVGADAARIAPLPKRSNLVRLADGGVTK
PKAEKMEKAQLTDKLFGLFERRTFWSLKQLLEETKQPAMHLRETVQEIANLARRGPNNGM
YSLKDIYRQQNKPAET
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggacttggaagagtttccacccggatcggagctcgtcgtgagcgccatgcaaaagtat
ttacagaaactaaacaaactgaacgctttgaacgaatgcgtacacaaattgaatccagaa
aagctggaggaaacggcgaagaaatattcgcgatcgaaaaaggataagaacgcgccggag
tggaggccgtacgcgacgccgtatttacttcgcgaacactggaggtatcaagtttgtcaa
aagttgaatatcgataagaaagatttaccggaggaggttacggaggcgttgagagcgtat
ttgtttccgagcgcgttggatacgcaaagagcgaaccatcgagcgtggctagtgaaagtg
ccaaactttgtcgatcgcgcgtggaaaagtttcagcgatagaaggagtaaagcagacaac
gagaacgatgaagatgggatggatattgatgcggaattgaacgataacgacgagctcggg
aaagtaagagtggtgatcgatcctttcgacaaagaaaacaaagaagcgtttgcggtgacg
ctaaatgcagccgtcaacgaagacgaagagcacgaaataccagtaaaatatatcatgacg
gagaatatagaagcgccagaaattcacgtgttttcggagactcgcgaaggtaccgcggcg
gcgacgtcggcgatggacgtcaacgagttcatcgtcgaagcgaaagttcataaaaaatta
gacatgcgaccaaaagatgcctccgatgcagcctacgctcgggtttcgaaaaatagatta
gaaaaagcgcaatctaaatcgaggtttgttcaatccgtcgtcggagcggacgcggcgaga
atagctccgttgccgaaacgttcaaatttagttcgattagccgacggcggcgtgacgaaa
ccaaaagcagaaaaaatggaaaaagcacaattgacggacaaattgtttggtctattcgag
aggcgaactttctggagcttaaaacagttattagaagaaactaagcaaccggccatgcac
ttgagagagaccgtgcaggagattgcgaatttagccaggcgaggtccaaacaacggcatg
tactctttgaaagacatatacagacagcaaaacaaacccgccgagacttag
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