Bathycoccus prasinos: Bathy13g01890
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Entry
Bathy13g01890 CDS
T03089
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Bathy13g01890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpg03041
]
Bathy13g01890
Spliceosome [BR:
bpg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
Bathy13g01890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-UBP
UCH
ESF1
Motif
Other DBs
NCBI-GeneID:
19012141
NCBI-ProteinID:
XP_007509659
UniProt:
K8EMP0
LinkDB
All DBs
Position
13:complement(418515..419993)
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AA seq
492 aa
AA seq
DB search
MPPKRKRGATVKAASSKAKSIKASGGDEDGDEDNAADDDTTHAGVGGPKKKKMKMKNDEQ
NQQPTPTTKEDETTTKTEHTCTPPPPPKTCPYLSFVNRPLLDFDFEKRCSVSFAKENCYC
CLTCGHFFAGRGPKTPAYTHALERENHFVFMHLENGRAFCLPDNYEIFDASLEDVRKVLF
PRFTSEEIKRLEKEAIWSKALDGTEYLVGVVGLNRVENAKGVNSIVQSLARVEKLRAHFL
SASLIRSDGNNNNKNENDTLQSLCQRIWNKHNFRGHTSPDSFVRKLRKQIKLAHPEKLET
DIDNLFNDPFATLRHFLTFVVPKKYVDELFRGELLMLNQKNKTQPFVFVPLKLPDAPLFR
DVMEKNAIPQVALAELLKPFALKTAPEYLILAFVNRFSKNQFTKEVSKNPTIVTFPVKNL
KIQASSAAGSNSNSNPFSYDLLANVDSAGKATVKHVDGNWYETNDLFVNEVLAQQVTLGE
TYVQIYKRVASP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgaaacggaaacgaggagccaccgttaaagcggcttcctccaaggcgaagagt
atcaaagcgagtggtggtgatgaggatggtgacgaggataacgccgctgatgacgatact
actcatgccggggtgggtggtccgaagaagaagaagatgaagatgaagaacgacgagcaa
aatcagcagccgacaccaacaacgaaggaggatgaaacgacgaccaaaaccgaacacacg
tgtactcctcctccaccaccaaaaacgtgcccgtacttatccttcgtcaaccgcccgctg
ttggactttgatttcgaaaaaagatgttcggtctcgttcgcgaaagaaaactgttactgt
tgcttaacctgcgggcattttttcgccgggagaggcccaaagacgccggcgtatacgcac
gcgttggaacgagaaaaccacttcgtgttcatgcacttggaaaatggcagagcgttttgt
cttccagataactacgagattttcgatgcgagtttagaggacgtgaggaaagtgttgttt
cctcgatttacgagcgaagagattaagcggttggagaaggaggcgatatggtcgaaagcg
ttggacgggacggagtatttagtcggcgtggttgggttgaatcgagtggagaacgcgaaa
ggcgtgaattcaatcgtgcaaagtctcgcgagggtggaaaagttaagggcgcatttttta
tccgcgtctttgattaggagcgacggaaacaacaacaacaaaaatgaaaacgacacgttg
caatcgttgtgtcagaggatatggaacaaacataactttcgcggccacaccagtccagat
tcgttcgtgaggaagctcaggaaacaaatcaaactcgcacacccggagaaattagagacg
gacatcgacaatttattcaacgatccgtttgcaactttgcgacattttttaacgttcgtc
gtgccgaaaaagtacgtcgacgagctctttcgaggcgagctgttgatgctgaaccaaaag
aacaagacgcagccgttcgtgttcgtgccgttaaagctcccagacgcgcctttattccgc
gacgtgatggagaaaaacgccatcccgcaagtcgcgctcgcggagctcttgaaaccgttc
gcgttgaaaaccgccccggagtatttaatcttagccttcgtcaaccggttcagcaaaaat
caattcacgaaagaggtgagcaagaacccaaccatagtcacgttcccggtgaaaaacctg
aaaatccaagcgtcgtcggcggccggtagtaatagcaatagtaatcctttttcttacgac
ttgctcgccaacgtcgactccgccggcaaagcgaccgtgaaacacgtcgacgggaactgg
tacgaaaccaacgatttgttcgtcaacgaagtcctcgcgcaacaagtcacgctcggggaa
acgtacgtgcagatttataaaagagtagcatcaccatag
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