Bathycoccus prasinos: Bathy13g02920
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Entry
Bathy13g02920 CDS
T03089
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Bathy13g02920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpg03041
]
Bathy13g02920
Spliceosome [BR:
bpg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
Bathy13g02920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
PRP4
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_EML
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_DCAF12
WD_LRWD1
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_2nd
Beta-prop_Nup120_160
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
19012244
NCBI-ProteinID:
XP_007509605
UniProt:
K8FCE4
LinkDB
All DBs
Position
13:complement(691013..692839)
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AA seq
608 aa
AA seq
DB search
MEGEGTFCENKNDVVRELNLFVGKRRGEDEDEDKTSKNRLRIDDHRNASSSFTPPLPALD
DLLLPLPTSDREVKERLRSLDEPICLFGEGKAERRERLKRTLSAFVSSTTRTKTTKAIGE
GREVDEVDDTNGLNGETAANNQGRKKRKETFYTEGSALLTRARMRAAKFSLQRARERVLT
DSNKDNGDVDTGKEEKETRVTFLNQRRKECADLKRLRFAPVSSVIGDSRPLSTVASLLFE
RGDKSHHGMMVASSIKNESDGVEEDFRSEALGIVLSGSWTGAVKVWNIARSGMNKEKREN
EEEMMRGRSSDENINCIPALTIKASEERITGLAFSPLILATNDNEEDLPAFASASMDGTC
TLFSLSGKKIASLVGHVGRLAKVKYHPSGASIATAGYDKTIRLWDANTSQEIFCQEAHSR
PSYDCTFNDDGSLLFSTGLDAYARMWDLRSGRCLWTMKGHSKGVTSISVDVTNSLCVTGG
EDNLVKVWDLRKQENAYTIPAHSGLVSSVSFEPRRGCWFSSSSFDGTVKLWSALDFSLLA
RLEGHEGKVMDCSLGRTAAAGGGGGGGRGGRRRSRSSGSSSSDNDGERSNIGGFIASAGY
DRTLKIWK
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcgagggaactttttgcgagaacaaaaacgacgtcgtgcgagagctcaatctg
ttcgtcgggaaacgacgaggagaagacgaagacgaagataaaactagtaaaaatcgtctc
cgcatcgatgatcatcgaaacgcgtcgtcgtcgtttactccgcctcttccagcgcttgat
gatcttcttcttcctcttcccacgagcgaccgagaggtgaaggaacgattgcggtctctc
gacgaaccgatttgtctctttggagaagggaaagcggaaaggagagaacggttgaagagg
acattatctgcgtttgtttcatcgacgacgagaacgaagacgacgaaagctattggggag
ggaagagaagtggatgaagtagacgacacgaatggattgaacggagaaaccgccgcgaat
aaccaaggaagaaagaagaggaaagaaacgttttatacggaagggagcgcgcttttgacg
cgcgcgagaatgcgcgcggcgaagttttccttacaacgtgcgagggaaagagttttgacg
gatagcaataaagataacggtgatgtagacacagggaaagaagaaaaagagacgcgcgtt
acttttttaaatcaaagaaggaaagaatgcgcagatttgaaaaggttgcgatttgcgcct
gtatcctcagtcattggggattcgagaccacttagtaccgtagcttcattattgttcgag
cgaggtgacaaaagtcatcacggaatgatggtagcgtcttcgatcaagaatgaaagcgat
ggtgtcgaggaagacttccgcagtgaagctctcggcatcgttttaagcggttcttggact
ggagctgtcaaggtttggaacattgcacgcagcggcatgaataaagagaaaagagaaaat
gaagaagaaatgatgcgcggcagaagtagcgacgagaacattaactgtattcccgcgctt
acgatcaaagcttcggaggagcggataaccgggctagcattttcgcccttaatattggcg
acaaacgataatgaagaagatttaccggcgtttgcttccgcttcgatggatggaacgtgc
actcttttcagtctttcgggtaaaaaaatagcttctctcgttgggcacgttgggcgttta
gcaaaggttaaatatcatccgagtggcgcgtccatcgccacagcgggttacgataaaacg
atccgactttgggacgcaaatacttcgcaagaaatcttttgccaggaggcacattcgcgc
ccgtcttacgattgcacctttaatgacgatggaagtctattgttttcgactggtttggac
gcgtacgcacgcatgtgggatctcagatcgggacgatgtttgtggacgatgaaaggacac
tcaaaaggcgtgacgtcgatttcagtcgatgtcacgaattctttatgcgttacgggcgga
gaagataacctcgtaaaagtttgggatttgagaaagcaagagaacgcgtacacaattccc
gcgcactctggacttgtttcatctgtatcgtttgaaccaagacgaggatgttggttcagt
agttctagttttgatggcacggttaagctgtggagtgcgctagacttctctttactcgcc
cgcttggagggacacgaaggcaaagtaatggattgtagtttaggaagaacagcagcagca
ggaggaggaggaggaggaggaagaggaggtagaagaagaagtcgtagtagtggtagtagt
agtagcgataatgatggtgagagaagcaatatcggcggctttattgcgagcgcaggctac
gatcgcacgcttaaaatttggaaatag
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