Bathycoccus prasinos: Bathy14g01470
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Entry
Bathy14g01470 CDS
T03089
Symbol
UTP18
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Bathy14g01470 (UTP18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpg03009
]
Bathy14g01470 (UTP18)
Ribosome biogenesis [BR:
bpg03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
Bathy14g01470 (UTP18)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
WDR55
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
PEP5_VPS11_N
PHD_Oberon
B-prop_COPA_B_2nd
DUF7099
Motif
Other DBs
NCBI-GeneID:
19011842
NCBI-ProteinID:
XP_007509289
UniProt:
K8ENW2
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All DBs
Position
14:271794..272903
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AA seq
369 aa
AA seq
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MRKKVSDRDRINDTCALNWSKTNRNFPKVVENVRKMSDGKGIDQNLVEEEFNAIRVTDAN
SAAPCNSVVTSVDFSYENVSLLLTAGFDRKLRIFDIDGKRNSLKSSSLFEDLPLRKVKFT
SSGQILLSGKANFIYVYDINKSSVMSRVDVFGSEILIKGFAESPNTSEVQTTSIYGIGRT
LSVFSSRDYRKVATLNVSEDIVGASYSHSGRELFLAGSDGKVCTWDLRKMRCMDKKSLVG
SRKVTALNYSALDQLAVGDSDGVVNIFPRWKELFNDSSQKELVAGEKIMSLKSVVDGVSY
NCGGNLLALSSSVCKDSLRMVKQPSCTICSRWPTSKTPVNFVFCTTFSRESRYLAVGNAR
GRVLLYSLR
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaagaaagtgagtgatcgcgatcgcatcaacgatacctgtgctttgaattggagt
aaaacgaataggaactttccaaaagttgttgaaaatgttagaaaaatgtcggatgggaag
ggtatcgatcaaaatctcgtggaagaagagtttaatgcgatccgagttaccgatgcaaat
tcagcagcaccttgtaattctgtcgttacttctgttgacttttcgtatgagaatgtttct
ctgcttcttactgctggttttgatagaaagttgaggatatttgacattgacggaaaacga
aattcactaaagtcttcctctctgtttgaggatttacctcttcgcaaggttaaatttaca
tcttctggtcaaatattgttaagtggcaaggcaaatttcatttatgtatatgatataaat
aaaagttcagtcatgagccgtgttgatgtttttggctcagaaatactgatcaaaggtttt
gcagagtcacctaatacttcagaagttcagactacttcaatatatggtattggaaggact
ttatctgtcttctcaagtcgggactatcgaaaagttgcgactctcaatgttagcgaagac
atagttggtgcttcttactctcacagtggacgagaattatttttagctgggtctgacggt
aaagtttgcacttgggacttgaggaagatgaggtgcatggataaaaagagtttagtcgga
tccagaaaagtaacagccctcaactactcagctttagaccagttggcagttggtgatagc
gatggagtggtaaatatttttcctcgatggaaagagctttttaatgattcatctcaaaag
gagttggttgcaggtgagaaaataatgagcttgaagtctgtagtagacggtgtgagctat
aattgtggtggtaacttactagcactttcatcaagtgtgtgcaaggattctttaagaatg
gtcaagcagccttcgtgcactatttgctcccgatggcctacatccaagactcctgtcaat
tttgtgttttgtactacttttagtagagaaagcaggtatctcgctgtgggcaatgcacgt
ggcagagtgttattatattctctcagatag
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