Bathycoccus prasinos: Bathy14g01930
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Entry
Bathy14g01930 CDS
T03089
Name
(RefSeq) ATP-dependent RNA helicase DBP8
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
bpg
Bathycoccus prasinos
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpg03009
]
Bathy14g01930
Enzymes [BR:
bpg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Bathy14g01930
Ribosome biogenesis [BR:
bpg03009
]
Eukaryotic type
90S particles
Helicases
Bathy14g01930
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
19011980
NCBI-ProteinID:
XP_007509112
UniProt:
K8ENN0
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All DBs
Position
14:351304..352566
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AA seq
420 aa
AA seq
DB search
MSDEELSIRTFCSLGIKKWLAENAFKLGLCEATTVQKACIPPILKGLDVIGTSQTGSGKT
ATFALPILHILSQDSYGIFALCMTPTRELAVQISEQFSALSAGLTLRCQVITGGEEIQAQ
TRSILRRPHIIVATPGRLMDHFLNSPQVIGCFQNLRFLVLDEADRLLEPSFESELRILFE
NIPSKRQTLLFSASITRNIAALQHITMNDAFHFEAFEGLKAVSSCRQEYCFLPRVMRDAY
LLHILQQRENWDIRSSIIFTSTVRSCMILSGILDKLGIVTVSLHSMKKQKERKDSFARFK
SGEVSILLATDIASRGLDIPTVDMVINYEVPIASKDYIHRIGRTARAGRSGRSITLVTQH
DVKIVQKIEDAIDSKMRCLSLPEEEIVKNMNSVGSARRSVKISLLERTGFGEKVNKNHMK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgaagaacttagtattagaactttttgttctctgggcataaaaaaatggcta
gccgagaatgcgttcaagcttggattgtgtgaagctacaactgttcagaaagcatgcata
ccccctattcttaagggcttagatgttataggaacatctcagaccggtagtggaaagaca
gcaacatttgctcttccaatattgcacatactctcgcaggattcttatggtatatttgca
ttatgcatgaccccaactcgtgagcttgcagttcaaatttctgagcaattcagtgctctt
tcagcaggtttaacattaagatgccaggtaataactggtggagaagaaatccaggctcaa
accagatcgattttaagacgacctcatattatagttgccactcctggtcgtttgatggat
cactttttaaacagtcctcaagttattgggtgttttcaaaatctgagatttctagtcctt
gacgaagcagaccgtcttctagaaccttcttttgaatcagaattgcggattttgttcgaa
aatattccttctaaacgccaaacactcttattttctgcaagcatcactcgtaatattgca
gcattacagcatatcaccatgaatgatgcttttcattttgaggcatttgaaggtttgaaa
gctgtgagcagctgtaggcaagaatactgttttcttccaagagtaatgagagatgcatac
ttacttcatatattacaacagagggaaaattgggatatccgaagttctataatttttaca
agtacagtgcgttcttgcatgatattatctggtattcttgataaacttggaatcgttaca
gtgagtctacactcgatgaagaaacaaaaggagcgcaaagattcgtttgcaagatttaaa
tccggtgaagtaagtattctgcttgctaccgatatcgcttcccgcggtcttgacattcca
accgttgatatggtgataaattatgaagtacccatcgcgtcaaaagattatatacatagg
ataggccgaacagcaagagctggtcgaagtggacgttctattaccttagttacccaacac
gacgtaaaaattgtacaaaaaattgaagatgcgatcgactcaaagatgagatgcttatct
cttccagaagaagaaatagtgaaaaacatgaatagcgtgggaagtgcaaggcggagtgtg
aaaatctccttacttgaaagaactggatttggtgaaaaagttaacaaaaatcatatgaaa
taa
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