Bathycoccus prasinos: Bathy14g01940
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Entry
Bathy14g01940 CDS
T03089
Name
(RefSeq) hypothetical protein
KO
K10754
replication factor C subunit 1
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03030
DNA replication
bpg03410
Base excision repair
bpg03420
Nucleotide excision repair
bpg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bathy14g01940
03410 Base excision repair
Bathy14g01940
03420 Nucleotide excision repair
Bathy14g01940
03430 Mismatch repair
Bathy14g01940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpg03032
]
Bathy14g01940
03400 DNA repair and recombination proteins [BR:
bpg03400
]
Bathy14g01940
DNA replication proteins [BR:
bpg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
Bathy14g01940
DNA repair and recombination proteins [BR:
bpg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
Bathy14g01940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA
Rad17
AAA_22
RuvB_N
Sigma54_activ_2
NTPase_1
nSTAND3
AAA_30
AAA_assoc_2
TIP49
AAA_19
NPHP3_N
RCF1-5-like_lid
RNA_helicase
AAA_5
AAA_14
AAA_24
AAA_16
AAA_11
IPT
Motif
Other DBs
NCBI-GeneID:
19011786
NCBI-ProteinID:
XP_007509214
UniProt:
K8ENN8
LinkDB
All DBs
Position
14:353973..355559
Genome browser
AA seq
528 aa
AA seq
DB search
MVKSDRTTLKCFEDKQSESKQLWADKYKPTRISELIGNGRCVADLRRWLLEWQNKQGNKE
KKNKCKAVLISGPPGIGKTSSAIIVCTQLGFSVMEVNASDSRNKASKDVQTGLSGSTSNQ
VKELVTNRGLNFLKTTIHKNQVLIMDEVDGMSAGDRGGISDLIDTIKRSKIPIICICNDR
YSQKLKALQNHCFELNFQRPTKQQIHGRLSLIMKEENFHMQSNELDTVIESCNGDIRLIL
NQLQLRKLRTGSLSISGGKQLKDINLGVLSIVDVLMGYGASSQTIDRRIALCFNEPDLVP
LYIQENFPQMRPTHCCSDLQRLIFLGAASCALSDGDLVYSLVRSKQLWELASCSNLLACI
IPSSIVSGVRETFNLFPGERNFHRFPAWLGKNSSSSKMRRLLNEMHGHMISKGALKSSSN
VLRQHYIPLLRSYTTIPLLSKHVGGLNNRGIQDAVRFMRVYGITRVDWDSLNELRKFSGK
GPAFEDSIQISASTKSSFTRECNKILDQVPTKHELKLQDGYSSDGNQE
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggttaagtctgacaggacaactttgaagtgttttgaagataaacaaagcgaatcaaag
caactatgggctgataagtataagccaactcgaatctcagagctgatcgggaatggtagg
tgcgtagccgatctgcggcgatggcttcttgagtggcaaaataaacaaggaaataaagag
aagaaaaacaagtgtaaagccgtgctgattagtggtcctccaggtataggcaagacttct
tccgctattatagtttgcacgcaacttggttttagtgtcatggaagtaaacgcaagcgat
tcaagaaataaagcctcaaaggatgttcaaacaggtttatctggttcaacttcaaaccaa
gtcaaagaattggtcactaatcggggtctcaattttttgaaaacaacgattcataaaaat
caagtattaataatggatgaagtcgatggaatgagtgcaggcgatcgtggtggaatatct
gacctcattgatacgataaaacgctcgaaaattccaataatttgtatctgtaacgatcgt
tattcacaaaagttaaaggctttgcaaaatcactgttttgaactcaactttcagcgacct
acaaagcaacaaatacatggacgcttgtccctcattatgaaagaagaaaattttcacatg
caatctaatgagttggatactgtaattgagtcatgtaatggagatattcgactgattctc
aatcagcttcaattgagaaagctaagaacaggttcactctcaatttctggtggaaagcaa
ctgaaagatattaatttgggagtactttcaattgtagatgtacttatgggatatggtgct
tcaagccaaaccattgaccgtcgtatagcattatgtttcaacgagcctgatttagttcca
ttgtatatacaggaaaactttccccaaatgaggccaacacactgttgctcggatcttcaa
aggctcatatttttaggtgcagcttcctgtgcgttatctgatggtgacttggtctattcg
ctggttcgatcaaaacaactttgggagcttgcatcttgcagtaatctcttagcgtgcatt
attccttcttcaatcgtatctggagttcgtgagactttcaacttatttccaggtgaacgt
aattttcaccgatttcctgcttggctcggtaagaattcttcaagttctaaaatgcggcgt
ctactgaatgaaatgcatggtcatatgataagtaaaggagcacttaaatccagctctaat
gtactcagacaacattatattcctttacttcgatcatatacaacgataccacttctttca
aaacatgttgggggcttgaacaatcgtggaatacaagatgcagtgcgctttatgagagta
tatggaattacaagagttgactgggattcattgaatgaactccgtaaatttagtggaaaa
ggtcccgcttttgaagacagtattcaaatatcagcatcaaccaaatcttccttcacgcgt
gaatgtaataagatcttggatcaggttcctacaaagcatgaactaaaattgcaggatggt
tattcaagtgatgggaatcaagaataa
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