Bathycoccus prasinos: Bathy14g01970
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Entry
Bathy14g01970 CDS
T03089
Name
(RefSeq) HEAT repeat protein
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
bpg
Bathycoccus prasinos
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpg03009
]
Bathy14g01970
Ribosome biogenesis [BR:
bpg03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
Bathy14g01970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
HEAT_EF3_N
V-ATPase_H_C
MS_channel_3rd
Motif
Other DBs
NCBI-GeneID:
19011968
NCBI-ProteinID:
XP_007509165
UniProt:
K8EN06
LinkDB
All DBs
Position
14:complement(359434..366969)
Genome browser
AA seq
2511 aa
AA seq
DB search
MTQNFSEQISEVRVTLNRLNQVKKSKCKTCSFFKDALLKWSELNFRKDFIDYVSEVREIS
ETLPQILLHQDVLVQSLLRRFCIQSKNSFEALFDLLEAISRDVGREFLKYFPEAMIKFES
LIKEGVEHEPEILKQLFTCFARLCKLLHEDLSRDISGTLRITKNLRMHKSANIRSFTVQG
LALILRRATQVQISIGILKILREIEGDTGKDKLEISNFNTASSVKCESAGALLAETVRGA
AHGLHSTSTKIFTVIFDPDTELFAESHLFEVANEMLRKVCSFGRRGRLGILWDTLLSAIR
TNLQSEKSNANKINYHMKLVSMMVKHNNGSAVENFMPIFEVFELTLEFYCISKVMNQDDS
IQQTLFELIFNICDAHNIVYGSSAGPFKMAERAIQWVRLISIASSHSIVKYLKGLNQRAR
LQNLAAMNMLKIFTSVCLVKFLEEVSDVGIAITSESCRILLECNCVDRDFLVENEINHVK
IINILQTHQSCVYPLSVLWGAVRVAPFCVEFEACHSIVESILDYALTKLETLQEEKKITE
DEAIKPTFAILVAGLQALVTLNKLSNVTSQYAETIYPRLFFRVIKISRLYSGPLLCATEL
LESKHMLNTSMIFLKAAIPENFGGLTSSNRHVRYANLKYLSVLMVDEKEKSWMVVKDILS
KFCILNAQDPGKSTKLLSNLRQYEVMLQAVSRSLSSTTIPHQSIKLIMSVCIGALNIKLS
TLWPSIISTLGMLLNMYAEAREVFIFHLEETQLECNLELVNKNESKIPNLDVQIDEIEVQ
EFIALQINQVEYGLNPWIRLNLLLDTLSKFSFSDSVFYHRISAEFLKYTKWEINTNCFAW
KTGMQKWLHSFDNSLRGGYSFLGFQECSEIYCKLLEMLQSNDPQLACLAIRCLGHWDFPY
LTRDIIVHLQAIATPKTTKQALTSLCFPGHVSEQKLGITVIEKQHRSKIVPLVLQILLPR
LRKGSSRNISIRKASYSWMAELDSREVLPLMRTFFSIVIHNQLVLDDMIHLAIENDFREE
SCLETCLDFSMLSMKSINIFFRNLEDLLYYLGEHVLEYIQVIVPISMRLICTVAGICEHE
RFIKVNKTASPCTSYNTDRVDQNKNCILDATLHRDERKHARNVRTYSLRVLADLLIRHPQ
FEFRVYFNDLVYIMKPLLLRLSNECSASIPPVILQLVRSLASSHHLLLTFLSVEESTSSL
KFVWETLKSEVASEQSRVLCLDIAESLTCHTEIDNVGNKKMAKQILMKHSKELFESLQIL
VLHPIQNPNRAGKWVRSRFNLKLEHTFTLVSRLSLTLGGKNAVHATIVSLDRLATFPRLD
EGMLSKLLLGFSTAFLDSSAIVNPKDIDKFWALIIPFLSKVRSISVRSEIIDALSAIAKN
FDSLWVSTKILRKLNSTVENSLEEVNFEMRLKAYEKLTTNWFCANSQQNMKAILFQALHD
LDSSDFAICHAAQSTVQNFIDALSIPSCKDTFTLVYSEIVLPGIKRSMNSSEKSKRSVAI
HLVGHLAKTQPHCAPGLSVLSKSDSETDFFINITHLQSHRRTRALTQLESASTSSECRLS
TVLDYYIPIVLMCLADPVSNVAATAVSVVRQISSKLPWPAFKDILRKLFRKFYSGYLQNS
AYLRAFASVLENLDRFSNLEDQEKFRDLFKEFYPKLIKFLPDRENEIGSIKKEVSPALVL
SCAHILSFLPEHELKIHLQRLILLLCVSLVDRSQGIRDAARVSLSNVARVFGAPYVPYVI
RILRAQLLNGFQLHVLGSITYDILKVTTLEAQNVEVDAFLPEVLPILDADIFGEVSEARE
IAKITAKIPEARHSRSLESIELLSVRASFPASMPILLSLVTRRLHDFGNIQSNRKIEQIL
FSIHKGILVRKNLEGKEILVVARSILSIDSSAEFLSFDNIVADENISTTQEINTTVINNN
PVIVLFALRLIKGVLKHFSTKNIPDGERKEYFNILEDIVPVLFRLMNCANHEIPLLCLQI
LSDLTNMRLSKFEHNPDSLIRRILALLNASGSDPQLAQDCLRLLSNLMSRYANVSPSNAQ
YRVVLGYAFDNIEVESSTSVCHSVLRAILSRRPLLSEIYTGMDGICCLVATGTSEHSRKM
CAQTFLQFLLDYPLGARRLQDYLEQLIANLKYECPVGRASVLNTLHAVILKFPKSVLRDT
AEVMFVPLIVQLGTDASSICRRGAGETIAALLSCISEEKANIFLTWLQKWFTEEQSMTLK
RLSVQVMNVALEICPEKVISTIRSIWPQILSVLEIQNFNKDEKWLLQYNLLLFIERLWVV
TPQFFKYREIKIEKTIFLIVQLLKHEHEWLQSSSTRILGQYLKMRGDDYSLNSENLSFQH
DDVYLELAVNNSMLLFENNFKSSDISIELEVLRQNAKNIASITLLFLSKNASLTEKSTEM
RANKGITFLQRVGRYCIVASNCIREVSIRCLAGIIAGIDVEMLFSHPSILYELIFPCYIC
IDPKVNGISIEHRELALEVLQLLRSLVEDRYFNEVYTSVQSKLKFRRKWRK
NT seq
7536 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaaacttttcagaacaaatctcggaagtgagagtcactcttaacaggttgaat
caagtcaagaaatctaagtgtaagacttgttccttcttcaaggatgctttactgaaatgg
tctgagctgaattttcggaaagattttatcgactatgtttcagaagttcgggaaatttca
gagacacttccacaaatattgctccatcaagatgttctcgtccaatccttgttaaggcgt
ttttgtattcaatccaagaactcatttgaggctctttttgacttattagaagcaatatca
cgggatgttggtagagaatttttgaaatattttcctgaagctatgattaaatttgagagt
ttaataaaggaaggcgtcgagcatgaacctgagattcttaaacaactatttacttgcttt
gcacgcctgtgcaagttacttcatgaggatttatctcgtgatatttcaggaacattgcga
attacgaagaatttaaggatgcacaaatcagcaaatatccgttctttcaccgttcaagga
cttgctttgatcttgaggagagccacacaagtccaaatttcgattggaattttaaagatt
ctacgagaaattgaaggtgatactggaaaagataaattagaaatatctaatttcaacact
gcgagtagcgtgaaatgcgaaagcgccggtgcacttcttgctgagacagttcgtggcgca
gctcatggtctacattccacctccaccaaaatttttactgtgatatttgatcctgataca
gaactcttcgctgaatcccatttattcgaagtagcaaatgaaatgttgcgaaaagtttgc
agctttggacggaggggaagacttggaatattatgggacaccttactttctgctattcga
acgaaccttcagagtgaaaaaagtaacgcaaataaaataaattatcacatgaaattggtt
tcgatgatggtgaaacacaacaatggatctgctgtcgaaaactttatgcctatctttgaa
gtttttgaacttactctcgaattctattgtatctcaaaggttatgaatcaagatgactcg
atacagcaaactctattcgaactcattttcaatatatgtgatgcacacaatattgtgtat
ggatcaagtgctggaccatttaaaatggcagaaagggcgattcaatgggtgaggttgatt
tcgatcgcctcttcccactcaattgtaaagtatctaaaaggtctaaatcagagagcaaga
ctccaaaatcttgcagcaatgaatatgcttaaaatttttacctccgtttgtttggtcaaa
tttttagaagaagtatcagacgttggtattgcaattacttctgaatcgtgccgaatatta
ttggagtgcaattgtgtcgacagagattttttggtcgaaaatgaaattaatcatgtgaaa
attatcaacatattacaaacgcaccaatcttgtgtttatcctctgagtgttctatggggc
gctgtacgagttgcaccgttttgtgtggagtttgaagcatgccactccattgttgaaagc
atactagattacgctctcacaaagttagaaactttacaagaagaaaagaagattactgaa
gatgaagcaatcaaacctacttttgcaattctagtagcgggacttcaagctcttgtgact
ctaaataaactttcaaatgttacttctcagtatgctgaaaccatctatcctcgtttgttt
ttcagggtaattaaaatttcacggctttattcaggaccgttactatgtgctacagagctt
cttgaatccaagcatatgctgaatactagtatgatctttttgaaagcagcaattccagaa
aattttggaggacttacttcatctaatcgccacgtgcgatatgctaacctcaaatatttg
agtgttttaatggtggatgagaaagaaaaatcatggatggtagtgaaggatatactttca
aaattttgcattttgaatgcacaagacccaggaaaaagtaccaagctcctctccaacttg
aggcaatatgaagttatgcttcaggctgtctctcgatctctgagttccactactattcca
catcaatctataaaactaataatgagtgtatgtattggtgctttaaatattaagctttct
acattgtggccatccataatatcgaccctgggaatgcttcttaatatgtacgcagaggct
cgcgaagtctttatttttcatctcgaagaaacacagctggagtgcaatttggagctagta
aataaaaacgaatcgaaaattccgaacttagatgttcaaatagatgaaatcgaagtgcaa
gaatttatagcacttcaaattaatcaggtagagtatggattaaatccgtggattcggctt
aatttactcttagatactctttccaaattttcgttctcggatagtgttttttatcatcga
atttcagccgagttcttaaaatacacaaagtgggaaatcaatactaattgttttgcttgg
aagactggtatgcaaaaatggcttcattcttttgataattcacttagaggaggttatagc
tttcttggatttcaagagtgtagtgagatttattgtaagctgctggagatgcttcaatca
aatgatccacagttagcatgtttggcaatccgttgtttaggacattgggatttcccatat
cttacacgcgatattattgttcatctacaagcaattgctactccgaaaacgactaagcaa
gctctcacaagcttatgttttccaggacatgtgtcagagcaaaagcttggtattactgtg
atagaaaaacaacatcgatcgaagattgtgcctcttgttcttcaaattttgcttccacgc
ttgcgcaaaggttcaagtagaaatatttccatccgtaaggcttcatactcatggatggca
gaactagattccagagaggttcttccattgatgcgtacgtttttctcaattgtaattcat
aatcagttagttttagatgatatgattcatctggcaattgaaaatgatttcagggaagaa
agttgtcttgaaacgtgccttgacttctcaatgttgtcaatgaaatccattaatatattt
tttagaaatttggaggatttgttgtattacttgggtgagcatgtactcgaatatatacaa
gttattgtgccaatatctatgaggcttatctgtactgtggcgggtatttgtgaacatgag
aggtttataaaagtcaataaaacagcatcaccttgtacttcatataatacagatagagtg
gatcaaaataaaaattgcatcttagatgctacattacatagagatgaaaggaaacatgca
agaaatgttcgcacctattctttacgagtgctggcagatttacttattaggcatcctcaa
tttgaatttcgtgtatacttcaatgatttggtttacatcatgaaaccgctactgcttcgt
ctttcaaatgagtgtagtgcatcaataccaccggttattttacagctcgtgagatcttta
gcttctagtcatcatctcttgttaacctttctgagtgttgaggaatccacatcaagcctc
aagtttgtttgggagactttaaaatccgaagtcgcttctgaacaaagtcgtgtcttatgt
ttagatattgctgagagtcttacgtgtcatacagaaattgacaatgttggaaacaaaaag
atggctaaacagatcctgatgaaacattcaaaagaactgtttgaatcgcttcaaatactt
gttttacatcctattcaaaatccaaatcgtgcgggtaaatgggtgcgaagccgattcaat
ttgaagttagaacataccttcacattggtaagtcgtttgagtcttaccttgggaggtaaa
aatgcagttcatgcaactattgtatctttagatagactcgctacatttccgagactagac
gaaggtatgctatcaaaattactcttgggattttctacagcttttttggactcttcagca
attgtaaatcccaaagatatcgataaattctgggcattgataattccatttctaagcaaa
gtacgaagtatcagtgtgcgatcggaaataattgatgcgctttctgcaatagcaaagaat
tttgattctctttgggtgtcgacaaagattcttcggaaactgaattcgactgtggaaaat
agtttagaggaggttaattttgaaatgaggcttaaagcttatgaaaaattgacgacgaac
tggttttgtgcaaattctcaacaaaatatgaaagcaattctttttcaagctttgcatgac
ttagattcgtctgacttcgctatttgtcatgctgcgcagtcaacagttcaaaatttcatc
gatgctctttcgatcccttcgtgtaaagatacatttaccttagtatattctgaaatagta
ttaccaggaatcaagaggtcaatgaatagctccgagaaaagtaaaagatcagttgctatt
catctcgttggtcatcttgcaaagacacagcctcattgcgctcccggtttgagcgtattg
tccaaaagtgattctgagacggactttttcataaatattacacatctacagtcgcatcga
cgcactcgtgctctaactcagctagagagtgcttctacatcgtcagagtgccgtttatca
actgttttggactattatatacctattgtcttaatgtgtctggcagatcctgtatcaaat
gttgcagcaacagctgtatctgtagttcgtcagatttcatcgaaactaccatggcctgcg
tttaaagatattctgcgcaaactatttcgtaaattttacagtggctaccttcaaaatagt
gcatatttacgtgcatttgcttctgttcttgaaaatttggatcgcttttcgaacctcgaa
gatcaagaaaaatttcgagatctttttaaagaattttatccaaaattaataaagtttttg
ccggatcgtgagaatgagatcggatcgattaaaaaagaagtatctcctgcgctggttctt
tcatgtgcacatatcctcagctttcttccagagcatgaattgaagatacaccttcaaaga
cttatattgctgttgtgcgtaagtttagttgatcgatcccaaggcataagggatgcggca
agagtgtcgttatcaaatgtcgctagagtttttggagctccttatgtgccgtacgttatc
agaatcctgcgtgctcaacttctaaatggtttccaactacatgtcctcgggtcaataact
tatgatattctaaaagtaactactttagaggcacaaaatgtagaagtcgatgcttttctc
ccagaagtgttaccaatactagatgcagatatttttggtgaagtttctgaagcacgagag
atcgcaaaaattactgcaaagattccagaagctcgtcactcacggtcgcttgaatccatt
gagctgctttctgtaagagcgtctttccctgcttcaatgccaatattgctctcattggtc
accagacgtctccatgactttggaaatattcaaagtaatcgtaagattgaacagattctg
ttttctattcataaaggtattttagtcagaaaaaatcttgaagggaaagaaattcttgta
gtggccagatccattttgtcaattgattcttctgctgaatttctttcctttgataatatt
gttgcggatgaaaatatatctacaacgcaagaaatcaatactactgttataaataataat
cctgttattgttttgtttgctttgaggttgatcaaaggtgtactgaagcacttctcaaca
aaaaacattccggatggtgaaaggaaggagtactttaatatattagaggatatagttcct
gtactatttcgtttgatgaactgtgcgaatcatgaaattcctcttctatgtttacaaatt
ctttctgacttgacgaatatgagattgagtaagtttgagcacaatccagattcattaatt
aggcggatccttgctctattgaatgcatcaggtagtgatccacaacttgctcaagattgc
cttcgacttctctcaaatctaatgtcaagatatgccaatgtatctccgtcaaatgctcag
taccgtgtggttcttggttacgcttttgataacatagaagtcgagagtagtacttcagta
tgccattctgtattgcgtgctattttgtcacgtcgaccacttctgtcagaaatatataca
ggaatggatgggatctgctgtttagtcgcaactggaacctccgagcattcaaggaaaatg
tgtgctcaaacttttctccagtttttacttgattatccacttggagctagaaggttacag
gactatttagaacagcttattgcaaatctgaagtatgagtgtcctgtcgggagagcatcc
gtactcaatacactgcacgccgtgattttgaaatttccaaaaagtgtcttgagagataca
gcagaagttatgtttgttcctctaattgttcaactgggtactgatgcctccagtatatgt
cgacggggtgcaggggaaactattgctgctcttctgtcgtgtattagtgaagaaaaggct
aacatctttttaacttggttacagaaatggttcacagaagagcaaagtatgacgttgaag
cgactttcagtccaggtaatgaatgtagcattagaaatttgtccagagaaggtaataagt
acgatcagaagcatttggccgcaaattctttctgtattagaaattcaaaatttcaataaa
gatgagaaatggttgctccaatacaatcttttattatttatcgaaagattatgggtagta
acacctcagttttttaaataccgagagataaaaatagaaaagacaattttcttaatagtt
caacttttaaaacatgagcatgaatggcttcagtcatcatcgacgcgaatattgggtcaa
tacttaaaaatgcgtggagatgattattcattgaattcggaaaatctttcttttcagcat
gatgatgtttacttagaacttgctgtaaataattcgatgctactattcgagaataacttc
aagagcagtgacatatcaatagagctggaagttttaagacagaatgcaaagaatatcgcg
tcgattacattgctatttctttctaagaatgctagcttgaccgagaagagtacagaaatg
agagcaaacaaaggaatcacatttctacaaagagttggcagatactgtattgtggcaagt
aactgcattcgtgaagtgagcatacgttgtctcgctggaattatcgctggaattgatgtt
gaaatgttgttttctcatcccagcatcctttatgagctcatattcccgtgctatatatgc
atcgatcctaaagttaacggaatttcaatcgaacatagagaacttgcacttgaagtactt
cagcttttacgaagtcttgttgaggacagatattttaacgaagtatatacctccgtgcag
tccaagctaaagtttcgaagaaaatggaggaaataa
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integrated database retrieval system