Bathycoccus prasinos: Bathy15g01160
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Entry
Bathy15g01160 CDS
T03089
Name
(RefSeq) hypothetical protein
KO
K14308
nuclear pore complex protein Nup54
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Bathy15g01160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpg03019
]
Bathy15g01160
Messenger RNA biogenesis [BR:
bpg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
Bathy15g01160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nucleoporin_FG
DUF7547
Motif
Other DBs
NCBI-GeneID:
19011470
NCBI-ProteinID:
XP_007508825
UniProt:
K8EPF0
LinkDB
All DBs
Position
15:complement(205620..207776)
Genome browser
AA seq
718 aa
AA seq
DB search
MFGAANNNTNTNAGGGLFGGGLNQNQGGGGLFGSNNNNNNNNTNAPGMFGQQQQSAALGG
GGGGGQGLFGNAGNNSTPFGTNSNQNQGGGGGLGGAFGGNNPTQTSTSSGLFGNTNNNTP
QQQQGGGGGGLFGNTNTAGFGQQQQQQQPAPGGIFGNANTSAATTQGGQGGGGLFGRPPT
SGGGGLFGGGGAAGGSSLFGKPAGTASTIGAGGGLFGGGGGGGGGGGFGNANTASGNQPN
QSSGGSLFSGGLGQQQQQQTNTTPSLFGNRPSPLGATQPQNHQGLTQFQQQQNAFFNVPE
SITTQAQGGPTLFGGNLAPSEALLRARQQRHLASQPPASGTTLEPVKELHDVMNAYNPQH
PEYRFKAFFYNIAQDPRQKVKIQNIDERTWHELLDKVGGEENENGLWPCRVDGFDGLYQR
EQAQEEELKSQEAFVNAYNQCIRQINSWKEGSYEVRRTQCERRREEHAHRVLKVMRKLES
FRAAYHRRVNPQLSMRRGGGTAYNRGAVNGGSTFASKEERELFEVLQNLKRALDGSGKES
LSRQAQQLTTTARVKTQELSRQLATSPLRGGGGSLFAGTTTANNGGYEINHQRTTTSPPS
SSGQQQTKNKKKSNKPVLLQPYDRERAEVTKTDLDDLSSHKDVVDHLAGNIKSMREDLTR
MCLAYGLQPVISATTVDPLSFQPQQQYQQQQQQQQQNPAALAAHQYGTTTTPTRSTFF
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgccgcgaacaacaacaccaacaccaacgcaggtggtggactctttggtggc
ggattgaatcaaaatcaaggaggaggaggtttgttcggctcaaacaataacaacaataac
aacaacaccaacgctcccgggatgtttggacaacaacagcaaagtgctgctctcggtggt
ggtggtggtggaggacaagggttgttcggaaacgccgggaataatagtactccttttgga
acgaattcgaatcaaaatcaaggaggaggaggaggtttgggcggtgcgttcggaggaaac
aatccaacgcagacatcgacatcgagtggattattcgggaatacgaacaacaatactcct
cagcaacaacaaggaggaggaggaggagggttgtttgggaacaccaacaccgcgggtttc
gggcaacaacaacaacaacaacaaccggccccgggtgggatttttgggaacgcgaatacg
agcgctgctactactcagggaggacaaggaggaggaggattgttcgggagacctccaacg
agtggtggtggagggttgttcggaggaggaggtgctgcaggtggatcgagtttgttcgga
aaaccggctggtacggcgagcacgataggcgcaggaggaggactttttggcggaggagga
ggaggaggaggaggaggaggattcggcaacgcgaatactgcgagcggtaatcaaccaaac
caaagcagtggcggtagtctcttcagcggaggattaggacaacaacaacaacaacaaacg
aacacgacgccttcgttgttcggtaatcgaccgtcgcctctcggcgcgacgcaaccgcaa
aatcatcaaggactcacgcagtttcagcaacaacaaaatgccttctttaacgttccggaa
tcaatcacgacgcaagcgcaaggcggtccgacgttattcggcggcaacttagcgccgtcg
gaagcgctgctcagggcgcgacaacaaagacacttagccagtcaaccgccggcgagcggg
accactttagaaccggtcaaagagttacacgacgtcatgaacgcgtataacccgcaacat
ccggagtacagattcaaagctttcttttacaacatcgcgcaagatcctcgacagaaagtg
aaaattcaaaacatcgacgaacggacgtggcacgagttgctcgataaagtcggcggcgaa
gaaaacgagaatggattgtggccgtgtcgagtagacggtttcgacggtttgtatcagcga
gaacaagctcaggaagaggaattgaaatcgcaagaggcgttcgtcaacgcgtacaaccag
tgcatacgccaaatcaacagctggaaagaaggctcgtacgaagtgaggcgaacgcagtgc
gaacgccgacgcgaagaacacgcgcacagagtgttgaaagtcatgcgaaaactggaatcg
ttcagagcggcgtatcacagaagagtgaacccgcaactgagcatgagaagaggtggcggt
actgcgtacaatcgaggcgcggtgaatggtggatccacgttcgcgtcgaaagaggagcga
gagttgttcgaagttttgcaaaatctgaagagagcgttggacggttccgggaaggaaagt
ttgagtcgacaggcgcaacagttgaccaccaccgcgagagtgaaaacgcaagagttatcg
aggcaattagcgacgtcacctttacgaggtggaggaggtagtttattcgcgggcactact
accgcgaacaacggtggatacgagatcaaccaccaaaggacgacgacatctcctccttct
tcctccggacaacaacaaacgaagaacaagaaaaaatccaacaaaccagtcctcctccaa
ccgtacgaccgcgagcgcgctgaagtcaccaagactgacttggacgacctctcctcgcac
aaagacgtcgtcgaccacctcgctggaaacatcaaatccatgagagaagatttaacccga
atgtgtttagcgtacggtttgcaaccggtcatttctgcgacgacggtggatcctctctcg
tttcagccgcagcagcaatatcaacaacaacaacaacaacaacaacaaaaccccgctgct
ttagccgcgcatcagtacggaacgacgacgacgcccactcggtccacatttttttaa
DBGET
integrated database retrieval system
