Bathycoccus prasinos: Bathy15g02180
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Entry
Bathy15g02180 CDS
T03089
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Bathy15g02180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpg03021
]
Bathy15g02180
Enzymes [BR:
bpg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Bathy15g02180
Transcription machinery [BR:
bpg03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
Bathy15g02180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
19011387
NCBI-ProteinID:
XP_007508902
UniProt:
K8FD01
LinkDB
All DBs
Position
15:complement(join(415346..418905,419042..419237))
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AA seq
1251 aa
AA seq
DB search
MGKHSAAAEDKEEDKGGGRRRGASEYGNNNNNTLECLYSGDRTKPIKTMKDKFELLPAFL
KVRGLVRQHIESFDYLIDEEIKKIVSAKANNKVTCDSDPNFYLRYKNVSVGSPQTVDERM
VKQDITPQQCRLRDMTYAAPVMVDVEYTKGKDIITTHDVCIGKIPLMLRSSRCCLRNKGE
DELARLGECPLDPGGYFVVKGVEKVILIQEQLSKNRVIIERDAKGLICASVTSSTHERKS
KTNVVQKGGKLYLKHNTFQEDIPIVIALKAMGLESDQELMQKAAGGSDPLCMSLLAPSLQ
ECTALDVFTQSEALEYCGQRIRSSQWRLAAIAGKDGKAAAAAVEASEGPTPGQPTTMGVN
NNANSRANANNKNNSNNDGSAPIGKENNVNANHININRRTRSDEARDIFAGVVLAHVPVE
DYDFRGKSAYVCVMIRRILLANLNPEEVDDKDYYGNKRLELAGQLLALLFEDCFKRLNAD
LKRQADAVLSKANRAQQFDVVKCIRQDTISNGLEHAISTGNWTVKRFRMERKGVTQVLSR
LSFISAIGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGESCGLVKNLALMTHV
TTDSDEEPLIKLARALGCELLEHLAGEELHQKDSALVLLNGSILGSVSQPKQFADKFRKL
RRSGRISEFVSVHVTKGFVHIASDGGRVCRPLIVVDETTGRLKMKQKHLDALKNKEWVFD
DFLKRGYVEYLDVNEENDAYIALHEKDLTADAHTHCEIEPFTLLGVCAGIIPFPHHNQSP
RNTYQCAMGKQAMGNLAFNQLNRMDTLMYTLCSAQKPLVTTKTIELIQYDRLGAGQNAVI
AVLSNTGYDIEDAVVINRASLDRGFGRCQVSRKYSATMKKYANRTQDKVLKPSITQMKKM
KNYRVLDDDGYAQVGVRIRNKDIYINKHMPLNTRDPMTNPDQLPDREFRPAPQVYRGPEV
DECVVDKVMLTVTDENQFVVKTLVRHTRRPEVGDKFSSRHGQKGVVGAILPQEDFPCTER
GICPDLVMNPHGFPSRMTVGKLIELLAGKAASEEGTFRDASAFASNDISSATAAGTTNKN
ESVDEIGEALLKAGYASDGKETLICGLTGEYLQARIFTGPVYYQKLKHMVLDKMHARARG
PRVVLTRQPTEGRARQGGLRLGEMERDCLIGYGASALVLERLMISADVFDAQVCVTCGLL
AYRDKASGRDCCHSCGIKAEVATLKVPYACKLLFQELQSMNICPRIALDEA
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggggaaacattccgccgccgccgaagacaaagaagaagacaaaggaggaggaagaaga
agaggagcatcagaatatggaaacaataataacaatactttagagtgtttatactccggc
gatcgaacgaaaccaatcaaaacgatgaaggataagttcgagttattacccgcgtttctc
aaagtcagagggttagttcgtcaacacatcgaatcgttcgattacttaatcgacgaggag
atcaagaagattgtctccgccaaggcgaacaacaaagtcacgtgcgactcggacccgaac
ttttacttgaggtataaaaacgtctccgtcgggtcgccgcaaacggtggacgagaggatg
gtaaaacaagatatcacgccgcaacagtgcaggttgagagatatgacgtacgcggcaccg
gtgatggtggacgtggagtatacgaaagggaaggatattattacgacgcacgacgtgtgc
attggaaagattccgctgatgttgaggagttctcggtgttgtttgaggaataaaggcgaa
gacgaattggcgagattaggcgagtgtcccttagatcctggagggtattttgtcgtgaaa
ggagtcgagaaggtgattttgattcaagagcagttgagtaagaacagagtgattatcgaa
cgagacgcgaaagggttaatttgcgccagcgtaacttcaagcacgcacgagcgcaaatca
aagacgaatgtcgtgcagaaaggaggcaaattgtatttaaaacacaacacgttccaagag
gatattcctatagtcatcgcattaaaagcaatgggtttagaaagcgaccaggagttgatg
caaaaagccgccggcgggagcgatccgttgtgtatgagtttgttagcgccgagtttacaa
gagtgtaccgcgttggacgtgtttacgcaaagcgaggcattggaatattgcgggcaaagg
attcgctccagtcagtggcgtttggctgcgattgctggaaaggacgggaaagccgccgcg
gcggcagtcgaagcgagcgaaggcccgacgccagggcaaccgacaaccatgggagtgaat
aacaacgccaatagcagagcgaacgcgaataataaaaacaacagcaacaacgacgggagc
gcaccaatagggaaagaaaataatgtcaacgcgaatcatatcaatataaacagacgaacg
cgttcggacgaagctagagatattttcgccggcgttgtgttagcgcacgtcccggtggaa
gattacgattttcgagggaaatcggcgtacgtgtgcgtgatgattcgacgtattttgttg
gcgaatttaaatcccgaggaagtggacgataaagattattacggaaataaaaggctcgaa
ttagccgggcaattgttagcgctgctgtttgaagattgttttaaacgtttaaacgcggat
ttaaagcgccaagcggatgcggttttatcaaaagccaatcgcgcgcagcagtttgacgtc
gttaagtgcatacgtcaagatactattagcaacggattagagcacgcgatatcgactgga
aattggaccgtcaaaagatttcgaatggaacgtaaaggcgtgactcaggttctctctcgt
ttgtccttcatatccgcgattgggatgatgactcgaatcacctcgcagtttgaaaaaact
cgtaaagtgagtggtcctcgagcgttacaaccgtcgcagtgggggatgttgtgtccttcg
gatactccggaaggcgaaagttgcgggttggtgaaaaatttagcgctcatgacgcacgtc
accacggattccgacgaagagcctctgataaaactcgcgcgcgcgctcggttgcgaactc
ctcgaacacttagccggcgaagagttgcaccagaaggacagcgcgctggtgttgttgaac
ggttccatactcggttccgtgtcgcaaccgaagcagttcgcggataaatttagaaaactg
cgtcggtcgggtcgcattagcgagtttgtatctgtccacgtgacgaaaggtttcgttcac
atagcttcggacggcggaagagtctgtcgacctttaatcgtcgtcgacgaaaccaccggt
cgattgaaaatgaaacaaaaacatctcgacgcgttgaaaaacaaagagtgggtatttgac
gatttcttgaaaagagggtacgtggaatacttagacgtgaacgaggaaaacgacgcgtac
atcgcattgcacgagaaggatttaaccgccgatgcgcacacgcactgcgaaatcgaaccg
tttacgcttttaggcgtctgcgccgggatcattccgtttccacaccacaatcaaagtcca
agaaacacgtaccagtgcgcaatgggtaaacaagccatgggcaatttagcgtttaatcaa
ctgaacagaatggatacgttgatgtacacgttgtgttcggcgcaaaagccgctggtaaca
acgaaaacgatcgagttgattcaatacgatcgtttaggcgcggggcaaaacgccgtcatc
gcggtgttatcaaacactggctacgacattgaagatgcggtagtgataaaccgtgcatcc
ttagaccgaggctttggtcgatgtcaagtctctaggaaatactcggcaacgatgaaaaaa
tacgccaatcgaacgcaagataaagtgttgaaaccgtcgataactcagatgaaaaagatg
aaaaactaccgagtgttggacgacgacgggtacgcgcaagttggggtgaggattcgaaac
aaagacatttacatcaacaagcacatgccgttaaacactcgagacccgatgacgaatccc
gatcaactccccgatcgcgagtttcgtccagctccgcaagtctaccgaggaccggaagtg
gacgagtgcgtcgtggacaaggtcatgctcacggtgactgacgagaaccagttcgtggtg
aaaacgttggtgcgtcacacgagacggccagaggttggcgataaattctcctctcgccac
ggtcaaaaaggcgtcgtcggtgccattttaccgcaggaagattttccgtgcaccgaacgc
ggcatatgcccagacttggtgatgaacccgcacggtttcccgtcgcggatgactgttggt
aaactcatcgagttactcgccggaaaggctgcctcagaagaaggcactttccgcgacgcc
tctgcgtttgccagcaacgacatatcctccgccaccgccgccgggacgacgaacaagaac
gagtccgtcgacgaaatcggcgaagctttactcaaagccggctacgcttcggacggtaag
gaaaccttaatctgtggtctcaccggcgaatacctccaagcgagaattttcaccggtcca
gtctattaccaaaagctcaaacacatggtcctggacaaaatgcacgcgcgcgctcgaggt
ccacgcgtcgttctcacgagacaacccacggaaggtcgcgcccgccaaggcggtttacgc
ctcggcgaaatggaacgcgactgcttaatcggctacggcgcttccgcgttagttctcgaa
cgtctcatgatttccgccgacgtcttcgacgcgcaagtctgcgtcacgtgcggtttactc
gcgtaccgagacaaagcgagcgggagggactgttgtcacagctgcggcataaaagccgaa
gtcgccacgttgaaagtcccgtacgcgtgtaagttgttgtttcaggaattgcaaagcatg
aacatctgtccgagaattgcactcgacgaagcttaa
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