Bathycoccus prasinos: Bathy16g00170
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Entry
Bathy16g00170 CDS
T03089
Name
(RefSeq) hypothetical protein
KO
K13095
splicing factor 1
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Bathy16g00170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpg03041
]
Bathy16g00170
Spliceosome [BR:
bpg03041
]
Complex A
Other components
Complex A specific factors
Bathy16g00170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
KH-I_KHDC4-BBP
SF1-HH
RRM_10
KH_1
KH_12
RRM_7
RRM_5
RRM_PARP14_3
RRM_RdRP1_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-GeneID:
19011229
NCBI-ProteinID:
XP_007508730
UniProt:
K8EQ19
LinkDB
All DBs
Position
16:29131..31500
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AA seq
789 aa
AA seq
DB search
MAKSSPSLFVALGSRWGKPVEEVDKKDSSSAYSPPIEEKENGDENNKNDDDDVTPAKKTT
TTEEDANDNNNNTKTTTTASSEKKRGKRKSRWETANEEEEKATRGEATANEATPNDTNYV
AVKRNAPLPGTIVISGGLRVQIPAALLGVRSMPKNARVDPELEVMFKDLETCNRNCLIGA
PFSEKEFLDKRDVLKTKNSKHFPKEVEENMTKPKDDAPPVYDLHGHRVSSKSEVNRDKYE
EKRGRLIEEIARRCPQFTPPADYLPSRKRRKIYIPVEEHPGYNFFGLIIGPRGNTQKKMQ
METNTKIVVRGRGAAKEGSGKQDVSVDEPLHVLVEGDTMVDIDRACEMIEKLLVPVDENM
NEHKREQLRQLAIMNGTLREVDEQELRLQQEEENALLYQLPDHIKSKTDEMYRKDIERVH
GTGNGLEDKYSDFLSEIGVDPSSLGGKAGVSYAVGGVDQYNPLNAKISGLGAGARAAPAS
SVGVGAGAPQAGAAPFSGGGNNPDDKNKLYVANLPPHVTNEQLRPIFEKFGRVTACDVVP
DRDKQLSCKGFAFVTFATEVEARSAIPHTNGMTIEGRVVETRIKNEPKVPIHNASGGDTA
QEDVNEEAKLYVANLPSHYEEEDLKTLFSPYGLVQSVKLVLDHTTGLSKGYGFVQMMDQE
QAMSAVVAVHGNMVEGCTKPLVVNIANDKKRGVLGNGYGAPMMPMMDAATAAYYYQQQQM
AMYGYQQYEQQYVVPEGIQVGDMNSAPAPPPPPEIPVPPPPEIPVPPPPDQSVVVDDLPP
PPPLPPSSS
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagtcatcaccctcacttttcgtcgcccttggaagtcgatggggaaaacccgtc
gaagaagtagacaaaaaagattcgtcgtcggcgtattcgccgccgatcgaagaaaaagaa
aacggtgatgaaaacaacaagaatgatgatgatgatgtgactcctgcgaagaagacaacg
acgaccgaggaagacgcgaacgacaacaacaataacacaaaaacaacaacaacagcaagt
tcggagaagaagcggggaaagcgtaaaagtcgatgggaaaccgcaaacgaggaggaagag
aaggcgacgagaggagaagcgactgcaaacgaagcaacacctaatgacacgaattacgtc
gcagtgaaacgcaacgcaccgttgccaggaacgatcgttatatccggaggcttacgcgtt
cagattcccgccgctctgttgggtgtacgttccatgccgaaaaatgctcgagtagatcca
gagttggaagtcatgttcaaagacttagaaacttgcaaccgaaactgcttgattggcgca
ccgttctccgagaaggaatttctcgataaacgggacgtgttgaaaacgaaaaacagcaaa
cactttccgaaagaagtggaagagaacatgacgaaaccgaaagacgacgcaccgccggtt
tatgacttgcatggtcacagagtgagttcgaaatctgaagtgaatcgagacaaatacgaa
gaaaagcgtggacgcttaatcgaagaaatcgctcgcaggtgccctcagttcacaccacca
gcggattatcttccctccagaaaacgaagaaagatttacatcccagttgaagaacacccc
ggatataactttttcgggttgattattggtccacgcgggaacactcagaaaaaaatgcaa
atggaaaccaatacgaaaatcgtggtccgcggaagaggtgccgcgaaagaaggctcgggg
aagcaagacgtatccgtagacgaacctttacacgttttagtcgaaggcgatactatggtt
gatattgatcgagcctgcgagatgattgaaaagttactcgtccctgtcgatgaaaacatg
aacgaacacaaacgagagcagttgagacaactcgcgattatgaacggtacgctcagagaa
gtcgacgaacaggagttaagattgcagcaagaagaagagaacgcacttttgtatcagttg
ccggatcatatcaaatccaaaacggacgagatgtacaggaaagatatagaaagagttcac
ggcactggaaacggtttagaagacaaatactcagatttcttgtccgaaatcggcgtcgac
ccgagctctctcggaggaaaagctggcgtgagttacgcggttggaggagtagatcaatac
aaccccttgaatgctaaaatttctggtttaggtgccggcgcaagagctgcaccggcatca
tccgttggagtgggcgcaggtgcaccacaagctggcgcggcgccgttcagtggtggcggc
aacaatccggacgataaaaacaagctatacgtggcgaatttaccgccgcacgtgacgaat
gaacaattgcgtccgatttttgaaaaattcggccgcgttacggcgtgtgacgttgttcca
gaccgcgataaacaattatcgtgcaaaggatttgcgttcgtaacattcgctaccgaggtg
gaggctcgatcggcaattccgcatacgaacggcatgactatcgaaggacgagtggtagaa
acgcgcattaaaaacgagccgaaagtcccgattcacaacgcgtctggaggtgataccgcg
caggaagacgtaaacgaagaggcaaaactctacgtggcaaacttaccatcgcattacgaa
gaggaggatttgaaaacgctgtttagcccatacggtttagtgcaaagtgtgaaattagtc
ttggaccacacgacaggtctctccaaagggtacggctttgtgcaaatgatggatcaagag
caagcgatgtctgcggttgtagctgtccacggtaacatggtcgaagggtgcacgaaacct
ctggttgtaaacattgccaacgataaaaaacgaggagtccttggcaatggttacggcgcg
ccgatgatgccgatgatggatgccgccactgctgcgtattattatcaacaacagcaaatg
gcaatgtacggctatcaacagtacgaacagcaatacgtcgttcctgagggcattcaagtg
ggggatatgaattctgcaccggcgcctcctcctccgccagaaattcccgtacctcctccg
ccagaaattcccgtacctcctccgcccgaccaaagcgtcgtcgtagatgacttgccccct
ccaccgccgctgccaccgtcttcttcttag
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