Bathycoccus prasinos: Bathy18g01020
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Entry
Bathy18g01020 CDS
T03089
Name
(RefSeq) hypothetical protein
KO
K10609
cullin 4
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03420
Nucleotide excision repair
bpg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
Bathy18g01020
09124 Replication and repair
03420 Nucleotide excision repair
Bathy18g01020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bpg04121
]
Bathy18g01020
03400 DNA repair and recombination proteins [BR:
bpg03400
]
Bathy18g01020
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bpg04147
]
Bathy18g01020
Ubiquitin system [BR:
bpg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
Bathy18g01020
DNA repair and recombination proteins [BR:
bpg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
Bathy18g01020
TCR (transcription coupled repair) factors
Cul4-CSA complex
Bathy18g01020
Exosome [BR:
bpg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Bathy18g01020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
19010815
NCBI-ProteinID:
XP_007508236
UniProt:
K8ER44
LinkDB
All DBs
Position
18:complement(192898..195843)
Genome browser
AA seq
981 aa
AA seq
DB search
MEQPKRDATERKLVIKSFKVAPKIPSNFLETTWNGRLLHALNAIHDEKPCEESYERLYRA
VEDVVVGNFGNELYEKLRQCLEARTEAVAKELKEKCLQGGSFHHGSSFKKTSGNSAGGLS
AFSSEEEQFLKFFVDDVWETRVKQMMLIRSLFLYLDRTTATVFTKNASLGASSDAAADSA
KEGGREMATGTNDPTSPLDDDERRRRSGTDAVTTTTTTPGSRESSNKESSFKLPLWELSV
QQFQKQMDANADVLRKAASGCLRLIEREREGEKIDRTLVKRFTTAMETLKRYGGGSNKSF
SSSSFPSAVASGQRNSKKRSAEEEEEEEEGTMMMVDDNKQQQLTPKSPPPLLVFNFERLF
LENTARFYAKESDKRFGITKKSASECADYLKHCQTRLNEETLDRAESYLQPQTKLVLTKT
VEKALIQDKKLEIIDSSDEMLADSAKVEDLKRLYSLLSRVPDGLKLLRDQFTKRLKFVGQ
KTVQDEAADCVDVLLRMKSSVDDIVVNAFENQRQFSEGAKVAFEMFINTSKNNRIAELIA
KFMDEKLKKGNKTSLSTEKDLDEQLNKAVALFRFIQGKDVFEAFYKKDLAKRLLFSKSAS
IDAERLVVGKLRSECGANFTTRLEGMFKDVDVSRDTVRNYRNNATNNTAASVGGETKADV
DMNASVAEGVDEDKSKRTRKKSTSIITKEEGGGEALEPLPPKPPMTNRETFSVNILTAGF
WPSAAKLDVVLPPELQSLRDDFESYYLEQHNNGRRLAWQHSTSTCVLKVKFASGTKELAV
SLAQAVIILAFNENDDDTNDDEQQHKQFTYKELKEKTNIPDVELKRTLQSLYGGKYRVLL
KTPMSKDIDEAKDAFKFNFNLQEKLVRLKISAIQSSTQASGKKRGAGGENGGDHPTTMEE
DENEAVRESVRADRFHQIDAMIVRILKTRKKLPHPELINEVVAKLQFPVNNQDLKKRIES
LIDREYVERDKDDRDVYHYVA
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaccgaagcgtgacgcgacggaaagaaaactggtcataaaatcgttcaaagtt
gccccgaaaatcccctcaaactttttggaaaccacttggaatggtcgattgttacacgct
ttaaatgcaattcacgacgagaagccgtgcgaggaaagttacgagcggttatatcgcgcg
gtggaagacgtggtggttgggaattttgggaacgaattgtacgaaaaattgaggcaatgt
ttagaggcgagaacggaagcggtggcgaaagagttgaaagagaaatgtcttcaaggagga
agttttcatcacgggtcgtcgtttaagaagacgtccgggaacagcgcgggtggtttatcg
gcgttctcgtccgaagaagaacagtttctgaagtttttcgtggacgacgtgtgggagacg
agggtgaaacagatgatgttgattcggtctttgtttttgtatttggaccggacgacggcg
acggtgtttacgaagaacgcttccttaggggcttcttccgatgctgctgctgactctgca
aaagaaggcggcagagagatggcgactggtactaacgatccgacgtcgccgttggacgac
gacgaacgcaggcgacggagtgggacggacgcggtgactacgacgactactactccgggg
agcagagaaagtagtaataaagagagtagttttaaacttcctctgtgggaattgagcgtc
cagcaatttcaaaagcaaatggacgcgaatgcggacgtgcttcgcaaagccgcgagcggg
tgtttgcggttgatcgaacgcgaaagagaaggagagaagatcgatcgaactttagtgaaa
cgatttacgaccgcgatggaaacgttgaaaaggtacggcggcggatcaaacaaatcgttt
tcgtcgtcgtcgtttccttccgcggtagccagcggccagaggaattcaaagaagcgctcg
gccgaagaagaagaagaagaagaagaaggaacgatgatgatggtggacgacaacaaacaa
caacaattaacaccaaaatcaccaccacctttgttggtgttcaacttcgagcgtctcttc
ttagaaaacacggccagattttacgccaaagaatcggacaagaggtttggaatcacgaaa
aagtcagcttcggagtgcgcggactatttgaaacactgtcaaacgcgattgaacgaagaa
acgctcgatcgcgcggagagttatttgcaaccgcaaacgaaactggtgcttacaaaaacg
gtcgagaaagcgttgattcaggacaagaaactcgaaattatcgacagttcggacgaaatg
ctcgcggacagtgcgaaagtagaggacttgaaacgcttgtactcgttactctctcgcgtc
ccggacggcttgaaactcctgagagaccagttcacgaaacgattgaaatttgtcggccaa
aagaccgttcaagacgaagctgccgattgcgttgacgttttattacgaatgaaatcctcc
gtggacgatatcgtcgtgaacgcgtttgagaatcagcgccaattcagcgaaggcgccaag
gttgcgtttgaaatgttcatcaacacttcgaagaacaatcgaatcgcggagttaatcgca
aaattcatggacgaaaagttgaagaaagggaataaaacgtccttgtcgaccgagaaagac
ttagacgagcaactgaacaaagccgtggcgttgtttcgattcatacaaggcaaagacgtg
ttcgaggcgttttacaagaaggatttggcgaaacgcttgttattttcaaaatcggcatcc
atcgacgccgagcggttggtggttggcaagttacgatcagagtgcggagcgaactttacc
actcgtctggaaggaatgttcaaagacgtggacgtgagtcgagataccgtgcgtaactat
cgtaacaacgcgactaataacacggcggcttccgtcggcggcgagacaaaggcggacgtg
gacatgaacgcttctgtcgcggaaggcgtcgatgaagataaatcaaaaagaacaagaaag
aaatcgacatcaataataacaaaagaagaaggagggggagaagcgttggaaccattaccg
ccaaaaccaccaatgacgaaccgcgaaactttctccgtgaacatcttaaccgctggattt
tggccgtcggcggcgaaactcgacgtcgtcttaccgccggaattacaatcgttgcgagac
gattttgaatcgtattatttagagcaacacaacaatgggagacgattagcttggcaacac
tccacgtccacgtgtgtcctgaaagtcaaattcgcgagtggtacgaaagagttggcggtc
tcgttggcgcaagccgtaatcatcttggcgttcaacgagaacgacgacgatacgaacgac
gacgagcaacaacacaaacagttcacgtataaggagttgaaagagaaaacaaacatcccg
gacgtcgaattgaaacgcacgttgcaatccttatacggcggtaagtaccgagtgttatta
aaaaccccgatgagtaaagacatcgacgaggcgaaagacgcgttcaaattcaacttcaac
ttgcaagaaaaactggttcgattgaaaatctccgccattcaatcctctacacaagcgagc
ggtaaaaaacgaggcgccggaggagaaaacgggggagatcacccgaccacgatggaagaa
gacgaaaacgaagccgtccgcgaatcggtccgcgcggaccgattccaccaaatcgacgcc
atgatcgttcgaatcttaaaaaccaggaaaaagttgccgcacccggagttaatcaacgag
gtcgtggcgaaactccagttcccggtgaacaaccaagatttgaagaaacgaatcgaaagt
ctgatcgatcgcgagtacgtggaaagagacaaggacgatcgagacgtgtatcattacgtc
gcttaa
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