Paraburkholderia phymatum: Bphy_0013
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Entry
Bphy_0013 CDS
T00704
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
bph
Paraburkholderia phymatum
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bph03009
]
Bphy_0013
Enzymes [BR:
bph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Bphy_0013
Ribosome biogenesis [BR:
bph03009
]
Prokaryotic type
rRNA helicases
Bphy_0013
BRITE hierarchy
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GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ACC69209
UniProt:
B2JJS2
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All DBs
Position
1:15034..16425
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AA seq
463 aa
AA seq
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MTTQARPFSELPLSQAVLANLTQLGYADMTPIQAASLPIALAGHDLIAQAKTGSGKTAAF
SLALLARLDARRYAVQAMVLCPTRELADQVTQEIRRLARAEENIKVLTLCGGTPMRPQTA
SLEHGAHIVVGTPGRIMDHLERGSLSLDALNTLVLDEADRMLDMGFFDDIAKVARQCPKE
RQTLLFSATYPEGIAKLSQQFLRNPKEVKLEERHDDSKIRQRFYEVTEDERLHAVGQLLN
HYRPVSTIAFCNTKNQCRDLLDVLCAQGFHALALHGELDQRERDQVLIQFANRSCSVLVA
TDVAARGLDIAQLEAVINVDVTPDPEVHVHRIGRTGRADQEGWALSLASMNEMGRVGAIE
EAQGRDVEWHPLAELNAASDEPLLPPMETLQILGGRKEKIRPGDVLGALTGDAGFNGSQI
GKINVTEFSTYVAVERGIARDALRKLNAGKIKGKKVKVRLMDE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgacaacccaggcaagaccctttagcgaactgccgctctcgcaggcggtgctcgcaaat
ctcacgcaactcggctatgccgatatgacgcccatccaggccgccagcctgcccatcgca
ctcgccggtcacgatctgatcgcgcaggcgaagacgggcagcggcaagacggcggcgttc
tcgctggcgctgctggcgagactcgatgcacggcgttacgcggtgcaggcgatggtgctg
tgcccgacgcgcgaactcgccgatcaggtcacgcaggaaattcgccgcctcgcgcgcgcc
gaagagaacatcaaggtgctgacgctgtgcggcggcacgcccatgcgtccgcagacagcg
agtctcgagcatggcgcgcatatcgtcgtcggcacgccggggcgcatcatggatcacctg
gagcgcggcagcctgtcgctcgacgcgctcaatacgctcgtgctcgacgaagcggaccgc
atgctcgacatgggcttcttcgacgacatcgccaaggtcgcgcgtcaatgcccgaaggag
cgccagacgctgctgttctcagcgacctatcccgaaggcatcgcgaagctgagccagcag
tttctgcgcaacccgaaggaggtgaagctcgaagagcgccacgacgacagcaagatccgc
cagcgcttttacgaagtgacggaagacgagcgcttgcatgccgtcggccagctgctgaac
cattaccgcccggtgagcacgatcgcgttttgcaacacgaagaaccagtgccgcgatctg
ctcgacgtgctgtgcgcgcaaggttttcatgcgctggcgctgcatggcgaactcgatcag
cgcgaacgcgaccaggtgctgatccagttcgcgaatcgcagctgctcggtgctggtcgcc
accgatgtcgccgcacgcggcctggatatcgcgcagctcgaagcggtaatcaacgtcgac
gtgacgcctgatccggaagtgcacgtgcatcgcatcggccgcacgggccgcgcggatcag
gaaggctgggcgctgagcctggcgagcatgaacgagatggggcgcgtaggcgccatcgaa
gaggcgcaagggcgcgacgtcgaatggcatccgctcgccgaactgaacgccgcgagcgac
gaaccgctgctgccgccaatggaaacgctgcagattctcggcggccgcaaggagaagatc
cgtcccggcgacgtgctcggtgcgctgacgggcgacgccggtttcaacggctcgcagatc
ggcaagatcaatgtgacggagttctcgacgtacgtcgccgtcgagcgcggcattgcacgc
gatgcgctgcgcaaactgaacgcgggcaagatcaagggcaagaaggtcaaagtgcgtttg
atggacgagtga
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