Paraburkholderia phymatum: Bphy_0237
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Entry
Bphy_0237 CDS
T00704
Name
(GenBank) SNF2-related protein
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
bph
Paraburkholderia phymatum
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bph03021
]
Bphy_0237
Transcription machinery [BR:
bph03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Bphy_0237
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DEAD
ResIII
Helicase_C
AAA_22
NitrOD1
Motif
Other DBs
NCBI-ProteinID:
ACC69430
UniProt:
B2JC66
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All DBs
Position
1:266943..269915
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AA seq
990 aa
AA seq
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MNDPFVDLCLGVQALRRSVERQIAGLGGATGVAAMSYPHQLANVQRVLTDSRIRHLLADE
VGLGKTVQALMVLNALRIQNPKHRALILVPENLAPQWLLECQSRAHFVPLDHAPPRDETG
THVRIAYYEQLRSVTEIDPAVYDLLIVDEIHRLQSDARQRIAEVAGDFRQLLLLSATPRL
EDAQAFRQLLTILEPARISLAARSSETPEIVLREREAAIATLAANGTHDQWMQVGLALPP
EQTSLATLARTHCILRRVIHTRRRDFPDLLPQRVHHRIAVESTGDENARLEEVWKFISRS
AENDATTDLARLGQVALRSPRALSERINILRRRDQRDPEGFLLAATRHLDAGNGDSRLEA
LIDLLVDIWNVDPEEAVLVVAEDNPTVDYLSTAIPQYLPEIGARGRRRPLSITVKRNRDA
AATADIVDLFAEYGESLGGFVNGEAQLLIAADLAQVGLNLQHARKLIFFSIPWSPIAVEQ
WIGRLDRLGSAALEHQPGERNIDIFTICQRGQVDERVVSILDDFGIFERSIRLDGDEINI
VSQHIVEAALAANNDDWRSLSEEVRAVASDGSEVLHTPLLDELPWRPKQTRALADYFDRV
GVLGPVLEPSDARRAIVRSEVALRSWMRLIKSANGLRLWSGEDRDTPSRKFRLLHYYRSP
YSKAPIEPRFLLPGVDPGDGRRYAYLDRRRALESPPVATVHVDDNPVTRLNFLDHGDPVH
ETLLAEWAKIGKDGPACVEVLFPEGHPLKDEARRGVYLIAILSWIPGELHLSEPDLSSVL
PRLEETNIRQERKPILDAIANMEEDLRADRFWLNSVLTPRLDVLAAQYVDGGWNLAEPGI
ADALLMPWSLTVHGKDRTLSKGTVTGLTAELKTARNSGLELLRKEYANRHQRSLGERIDL
QDRIASRRYLIDSEATDLVLLRQAQLDDAVAQNLETSEQGFARSRFRTIRNARDMAVHAR
EVRLARFAGLAEALVKPAFSQYKLVTLTVA
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcccttcgtcgatctgtgccttggagtccaggcgttgcgccgctcagtcgaa
cgccagatcgctggccttgggggcgcaaccggtgtcgctgcgatgtcatacccgcaccaa
ctcgccaacgtccagcgggttcttaccgatagccgtatccgccatttgcttgccgacgag
gtgggtctcggaaagacagtccaggctttgatggtgctgaacgcgctcaggattcaaaat
ccgaaacatcgtgcgctcatccttgtgccggaaaatctggcgccgcagtggctacttgag
tgccaatcgcgtgcccattttgttccactcgatcacgctccaccccgtgatgaaactggc
acacacgtacggatcgcctactatgaacagttgcggtcagtcacggagatcgatccggcc
gtctacgaccttctgatcgttgatgagatacatcggctgcagagtgatgcacgacagcgt
atcgcggaggttgccggagacttccggcaattgttgctgttgtctgcaacgccaaggctt
gaagatgctcaagcgttccgacaacttctcacgattctcgaacctgcgcgcatctcgttg
gccgcgcgttcgtcggagactccggagattgtgctgcgcgagcgggaagccgcgattgca
acactcgctgccaacggaacgcatgaccaatggatgcaagtaggtcttgcgttgccgcca
gaacaaacaagtctcgcaacgctcgcccgtacccactgtattcttcgcagggtgattcac
acgcggcgccgagacttcccagacctactgcctcaacgtgtgcaccatcgcatagcggtt
gagtccacgggcgatgaaaatgcgcgcctagaagaggtttggaaattcataagccgttcg
gccgaaaatgatgccacaaccgatctagcgcgccttggccaagttgccctgcggtctcca
cgggcgctcagtgagcggatcaacattctaagacggcgtgatcagcgggatccggagggt
ttcctcttagccgcgactagacatctcgacgccgggaacggtgatagccgtcttgaagcg
ttgattgacttactggtagatatctggaacgtagatcccgaggaggccgtacttgtcgtt
gcagaggacaatccaactgtcgattatctttctaccgccattccgcaatacctgccagag
ataggcgctcgtgggcgtcgacgaccactatccatcacggtcaaacgaaaccgcgatgct
gccgctaccgcggacatcgtggatctgtttgctgagtacggagagtctcttggcggattt
gtaaatggagaggctcaactactcatcgcagctgacctggcgcaggttggacttaatctc
caacacgctcgcaaacttattttctttagtatcccgtggtcgcccattgcagttgaacaa
tggatcggtcgccttgaccggttaggaagtgctgccctcgagcatcaacccggcgagcgc
aacatcgatatttttacgatctgccaacgcggtcaggtcgacgaacgcgtggtctcgata
ctcgatgactttgggatattcgagcgaagcatccgcctagacggcgatgaaatcaacatc
gtcagtcaacatattgtcgaggccgctcttgctgcgaacaacgatgattggcgttcccta
tcggaggaagtacgcgctgttgcgagcgatggcagcgaagttctacacacgccactatta
gacgagttgccttggcgacccaagcagactcgcgccctcgctgattatttcgatcgagtc
ggggtacttggcccagttctcgagccctcagacgcgcgtcgcgcgatcgtgcggagtgaa
gtggcacttcgaagttggatgcgcctcatcaaatctgcaaacggtctgcgcctctggtct
ggggaggatagggacacgccgtcacgaaaattccgattgcttcactactaccgctctcct
tattcaaaagcaccgatagagccgcgatttttacttcccggcgtcgatcctggcgacggc
cggcgctatgcctatctcgaccgccggcgtgctcttgagtcgccgcctgtcgcgactgtt
catgtcgacgataaccccgtgactcggcttaactttctcgatcatggagatccagtccat
gagacattgttagcggagtgggcgaaaatcggaaaggatggacctgcatgcgttgaagtg
cttttccctgaggggcatccacttaaagatgaagcacgacgtggggtctatctaatcgcg
attttgagttggatcccgggagaactccacctatctgaaccagacctgtcatcggtactg
cctcgtctggaggaaacgaacatacgccaagagcgcaagcccatcttggatgcaattgcg
aacatggaggaggatctccgcgcagaccgtttttggctcaatagcgtccttacacctcgc
ctggatgttctggctgcacaatatgtcgatggcggttggaacctcgctgaaccaggtatc
gccgacgcacttctgatgccatggagtctgacggtgcatggcaaggatcggaccctttcc
aaagggacggtcaccggtttgactgctgaacttaaaaccgcgcggaattccggtcttgag
ttgctgcgcaaagagtatgcaaaccggcatcaacgctcactcggcgaacgcatcgatctt
caagatagaatcgcaagcagacgttatcttatcgactcggaggcaaccgaccttgtcttg
ttgaggcaagcgcaacttgatgacgcggttgctcaaaacctagaaacaagcgagcaagga
tttgcgcgaagccgtttccgcacgattcgtaatgcccgagacatggcggtgcatgcacgc
gaggtgagacttgcccgcttcgccggtttggccgaggcactggtaaagcccgcgttcagc
cagtacaaactggttacgctgacggtcgcataa
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