Paraburkholderia phymatum: Bphy_0677
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Entry
Bphy_0677 CDS
T00704
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bph
Paraburkholderia phymatum
Pathway
bph03030
DNA replication
bph03430
Mismatch repair
bph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bphy_0677
03430 Mismatch repair
Bphy_0677
03440 Homologous recombination
Bphy_0677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bph03032
]
Bphy_0677
03400 DNA repair and recombination proteins [BR:
bph03400
]
Bphy_0677
Enzymes [BR:
bph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bphy_0677
DNA replication proteins [BR:
bph03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bphy_0677
DNA repair and recombination proteins [BR:
bph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bphy_0677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
ATP-synt_DE_N
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ACC69867
UniProt:
B2JEJ0
LinkDB
All DBs
Position
1:762698..763876
Genome browser
AA seq
392 aa
AA seq
DB search
MSEPFLSEPALDVPIVFVDLETTGGSVGDHRITEVGVVEVGPNGVSSWTTLVDPGQPIPP
FIQQLTGITNDMVRGAPTFEAIAADLFARLDGKLFIAHNASFDRGFLRSEFQRAGFAFNP
DVLCTVRLSRALFPAEKRHGLDALVERHALMPSDRHRALADADLLWQFWQRLHGLVPVDV
LRAQIDKTMRRFRLAGDITEDLIDTAPAGCGVYAFYGESDAPLYVGRSVRVRQRLRSHLT
GERRSSKEMKLAQQVRRVEWRATGGEIGALLAEAQLIAALRPPNNRVPRVSRGDPVDAPW
PYDGAIAFEERDAAEGARVFHIVDGWRYVGHAPSLAEAATLLATSAPGAFELSTWRILQS
HLARGLRVLPLSRPVVQPTGAVTLAAAPAGAA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaccgtttctgtccgagcctgccctcgatgtgccaattgttttcgtcgacctt
gaaaccacggggggctctgtcggcgatcatagaatcacggaagtcggcgtcgtcgaagtg
ggaccgaatggtgtgtccagctggactacgctggtcgaccccggtcagcccatcccgcca
ttcatccagcaattgacgggcatcaccaacgacatggtgcgcggtgcgccgacgttcgaa
gccattgccgccgacctgttcgcgcggctcgacggcaagcttttcatcgcgcacaacgcg
agcttcgatcgcggtttcctgcgcagcgagtttcagcgagccggtttcgcgttcaatccc
gacgtactgtgcaccgtgcgcctctcgcgggcgctgtttcccgccgaaaagcgccacggc
ctcgacgcgctcgtcgagcggcacgcactcatgccgtcagaccggcaccgcgcgctcgcc
gacgccgatctgctctggcagttctggcagcgcctgcacggcctcgtacccgtcgacgtg
ctgcgcgcgcagatcgacaagaccatgcgccgtttccggctggcgggcgatatcacggaa
gacctgatcgatacggcgcctgccggttgcggcgtatatgcgttctatggcgagagcgac
gcgccgctctatgtaggacggagcgtgcgcgtgcgtcagcggttgcggtcgcatctgacg
ggcgaacgccgttcgtcgaaagagatgaagcttgcgcagcaagtgcgccgcgtcgaatgg
cgcgcgacgggcggcgagatcggcgctctgctcgccgaagcccaactgatcgccgcgctg
cggccgccgaacaaccgcgtgccgcgcgtgagccgcggcgatcctgtcgacgcgccgtgg
ccctacgacggcgcaattgcgttcgaggagcgggacgcggcggaaggcgcgcgcgtcttt
catatcgtcgacgggtggcgctatgtggggcacgcgccctcgctcgccgaggctgcaacg
ctgctggcgacaagcgcgcccggtgcgttcgaactgtcgacgtggcgcattctccagtcg
catctcgcgcgcggcctccgtgtgctgccgctcagccgcccggttgtccagccgaccggc
gctgtcacgctcgcagcagcccctgccggcgccgcctaa
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