Paraburkholderia phymatum: Bphy_0871
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Entry
Bphy_0871 CDS
T00704
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
bph
Paraburkholderia phymatum
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bph01011
]
Bphy_0871
Enzymes [BR:
bph01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Bphy_0871
Peptidoglycan biosynthesis and degradation proteins [BR:
bph01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Bphy_0871
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Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
Peptidase_M56
Motif
Other DBs
NCBI-ProteinID:
ACC70060
UniProt:
B2JFN2
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All DBs
Position
1:970823..972508
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AA seq
561 aa
AA seq
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MRFIFCALLVLTLAACASQGPTTNSLTTASNPASQQAVADALRKTATAKETINVDQGSVD
QLTSADSDLWGRIRRGFQMPDLQSDLVDMQANWYAQRPDYVQRMTERSQKYLYHIVEELE
ARHMPTELALLPFIESAYNPQALSVAKAAGMWQFVPGTGRTYNLKQNMWQDERRDVLAST
SAALDYLSRLHDMFGDWYLALAAYNWGEGNVQRAIARNEAAGLPTDYQSLRMPMETRNYV
PKLQAVKNIVANPQVYGLTLPSIPNHPYFVTVTTSHDIDVDTAAKLANMTPDEFRSLNPS
FKKPVILGATQPQILLPFDNASAFERNLKSYSGSLSSWTTYTVTERSRPAAIAEKIGVDA
DTLMAVNKIPAGMRLKPGSTIVVPRADDDDEDISADVAESATLAMEPDVPDTRKMLIRVR
RKQSMAVLADRYDVSIGQLKAWNRTRRDVVMPGQVVVLHVPVGKAMPSEPGPQKLATVPV
GGGVEKAGAQIADTHSESRYDKKRGRGHTGMVKVSEPVGKTDKPAPAKGKVTKVSTEAAG
KASKAETGSHHKVSASAKKSK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgagattcatcttttgcgcgttgttggtcctgacgctcgccgcatgcgcgagccagggg
cctacgacgaatagccttaccactgcttccaatcccgctagccagcaagccgtagccgac
gccctccgcaagaccgccaccgccaaagaaaccatcaacgtcgaccagggttccgtcgac
cagttgacgagcgcagacagcgatctttggggccgtatccgtcgtggtttccagatgccg
gacctgcaaagcgacctcgtcgacatgcaggcgaactggtacgcgcagcgcccggattac
gtgcagcgcatgaccgaacggtcgcagaagtacctgtaccacatcgtcgaagaactcgaa
gcgcgccacatgccgacggagctcgcgctgctgccgttcatcgaatccgcgtacaacccg
caggcgctgtctgtcgcgaaggcggcaggcatgtggcagttcgtgccgggcacgggccga
acgtacaacctcaagcagaacatgtggcaggacgaacgccgcgacgtgctcgcgtccacc
agtgccgcgctcgactatctgtcgcgcctgcacgatatgttcggcgactggtatctggcg
ctcgccgcgtacaactggggcgagggcaacgtgcagcgcgcgatcgcgcgcaacgaagcc
gccggtctgccgacggactaccagagcctgcgcatgccgatggaaacgcgcaactacgtg
ccgaagttgcaggcggtgaagaacatcgtggcgaacccgcaggtctacgggctcacgctg
ccgtccattccgaaccacccgtacttcgtcaccgtcacgacgtcgcacgatatcgacgtc
gacacggcggcgaagcttgcgaacatgacgccggacgaattccgttcgctgaatccgtcg
ttcaagaaaccggtcattctcggcgcgacgcagccgcagattctgctgccgttcgacaat
gccagcgccttcgagcgcaacctgaagtcttactcgggctcgctgtcgtcatggacgacc
tatacggtcaccgagcgcagtcgtcccgccgcgatcgccgaaaagatcggtgtcgacgcc
gatacgctgatggccgtgaacaagattccggcgggcatgcgcctgaagccgggttcgacg
atcgtcgtgccgcgcgccgatgacgacgacgaagacatcagcgccgacgttgccgaaagc
gccacgctagcgatggagccagacgtgcccgacacgcgcaagatgctgattcgcgtgcgt
cgcaagcagtcgatggcggtgctggccgatcgctacgatgtgtcgatcggtcagttgaag
gcttggaaccgcaccaggcgcgacgtggtgatgccgggtcaggtcgtcgtgctgcacgtg
cccgtcggcaaggcgatgccgagcgagccgggcccgcagaagctggccacggtgcccgtc
ggcggtggcgtggagaaggccggcgcccagatcgcggatacgcattctgaatcgcgctac
gataagaagcgaggccgcggccacactggcatggtcaaagtgtcggaaccggtcggcaag
accgacaagcccgctcccgcaaaaggcaaggtgacgaaggtttcgacggaagcggctggc
aaggcgtcgaaggcggagacgggcagccaccacaaggtctcggccagcgcgaagaagagc
aagtaa
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