KEGG   Paraburkholderia phymatum: Bphy_1310
Entry
Bphy_1310         CDS       T00704                                 
Name
(GenBank) phage SPO1 DNA polymerase-related protein
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
bph  Paraburkholderia phymatum
Pathway
bph03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bph00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Bphy_1310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bph03400]
    Bphy_1310
Enzymes [BR:bph01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     Bphy_1310
DNA repair and recombination proteins [BR:bph03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Bphy_1310
SSDB
Motif
Pfam: UDG DUF4130
Other DBs
NCBI-ProteinID: ACC70492
UniProt: B2JI98
LinkDB
Position
1:1468019..1469491
AA seq 490 aa
MHVTTIEDTFAAWREAARQALAQRVAPEEIDWRIRDGARAAPSTLFDDKSATPFESAVCV
EVLISRELAELLNDAALYRAPGRWAFLYRVLWRWHGGDRSVASPADSDGARLHKMAKAVR
RAKHDMIAYLRFRLRDASHDTPTPDLPEYVAWYEPEHDVLAWSAEHFARRMGRSTWLIST
PDGAAWWDGSALRVERRRAPSADLACTTADEAERLWLAYYRNTFNPARLNETALEQHMPV
RFWKGLPEGRLIPSLISEAKSGAQRVAQASSVGMLGGKSVSVDAHSAQPMRQHLSTLDAC
RHCELWQHATQAVDGIGPDDARIMLIGEQPGDHEDLAGKPFVGPAGRLLDVALQRAGLSR
DGLYLTNAVKHFKWTLRGKRRLHKTAAQQEIDACGYWLERELQRVRPAVVVTLGATALSA
LLHEKVNLSDWTGRTLNVDDMRVVATYHPSYALRQQHDEARERVLAAIIGALTRARDLSE
AVGERQHAPD
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgcatgtcacgaccatcgaggacacgttcgccgcgtggcgcgaagcggcccggcaggcg
ctcgcgcagcgtgttgcgcccgaggagatcgactggcgcattcgcgacggcgcgcgtgcc
gcccctagcacgctgttcgacgataaatccgctaccccgtttgagtcggcggtgtgcgtc
gaagtcctcatatcgcgcgaactcgctgaactgctgaacgacgccgcgctgtatcgcgca
ccgggccgctgggcgtttctctatcgcgtgctctggcgatggcatggcggcgaccgttcg
gtcgcgtcccccgcggattccgacggtgcccggcttcacaagatggcgaaggccgtgcgg
cgcgcgaaacacgacatgatcgcgtacctgcgctttcggctgcgtgatgcgagccacgac
acgcccacacccgacctgcccgaatacgtcgcgtggtacgaaccggaacacgatgtgctc
gcatggtcggccgaacacttcgcgcggcgcatgggtcgttcgacgtggctcatctcgacg
cccgacggcgccgcatggtgggacggcagcgcgctgcgggttgaacgtcgccgggcgccg
tccgccgaccttgcctgcaccaccgccgacgaagccgagagactctggctcgcctactat
cgcaacacgttcaatcccgcgcgcctgaacgaaaccgcgctcgagcagcatatgcctgtg
cgtttctggaagggcttgcccgagggccgtctgattccgtcgctgatcagcgaagcgaaa
agcggcgcgcagcgggtcgcacaggcgagcagcgtgggcatgctcggcggcaagagcgtg
tccgtcgatgcacacagcgcgcaacccatgcggcaacacctttcgacgctcgacgcgtgc
cggcactgcgaactgtggcagcatgcgacgcaggccgtcgacggcatcggccccgacgac
gcgcgcatcatgctgatcggcgaacaacccggcgatcacgaagatctcgcaggaaaaccg
ttcgtcggaccggcaggccggctactcgatgtggcactccagcgcgcgggtctgtcgcgt
gacggtctttatttgaccaacgccgtcaagcacttcaaatggacgctgcgcggcaagcgg
cgtctgcacaagacagcggcgcagcaggaaatcgacgcttgcggctattggctggaacgc
gaactgcaacgcgtgaggcctgccgtcgtcgtcacgctgggcgcgaccgcgttgagcgcg
ctgctgcacgagaaggtcaacctgagcgattggacgggcagaacgctcaatgtggacgac
atgcgggtggtcgcgacgtatcatccgtcgtatgcgttgcggcagcagcatgacgaggcc
cgcgagcgggtgctggcagcgatcatcggggcgctgacgcgggcgcgcgacctgtccgaa
gctgtaggggaaaggcagcacgcgccggactag

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