Paraburkholderia phymatum: Bphy_1310
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Entry
Bphy_1310 CDS
T00704
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bph
Paraburkholderia phymatum
Pathway
bph03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Bphy_1310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bph03400
]
Bphy_1310
Enzymes [BR:
bph01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Bphy_1310
DNA repair and recombination proteins [BR:
bph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Bphy_1310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF4130
Motif
Other DBs
NCBI-ProteinID:
ACC70492
UniProt:
B2JI98
LinkDB
All DBs
Position
1:1468019..1469491
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AA seq
490 aa
AA seq
DB search
MHVTTIEDTFAAWREAARQALAQRVAPEEIDWRIRDGARAAPSTLFDDKSATPFESAVCV
EVLISRELAELLNDAALYRAPGRWAFLYRVLWRWHGGDRSVASPADSDGARLHKMAKAVR
RAKHDMIAYLRFRLRDASHDTPTPDLPEYVAWYEPEHDVLAWSAEHFARRMGRSTWLIST
PDGAAWWDGSALRVERRRAPSADLACTTADEAERLWLAYYRNTFNPARLNETALEQHMPV
RFWKGLPEGRLIPSLISEAKSGAQRVAQASSVGMLGGKSVSVDAHSAQPMRQHLSTLDAC
RHCELWQHATQAVDGIGPDDARIMLIGEQPGDHEDLAGKPFVGPAGRLLDVALQRAGLSR
DGLYLTNAVKHFKWTLRGKRRLHKTAAQQEIDACGYWLERELQRVRPAVVVTLGATALSA
LLHEKVNLSDWTGRTLNVDDMRVVATYHPSYALRQQHDEARERVLAAIIGALTRARDLSE
AVGERQHAPD
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtcacgaccatcgaggacacgttcgccgcgtggcgcgaagcggcccggcaggcg
ctcgcgcagcgtgttgcgcccgaggagatcgactggcgcattcgcgacggcgcgcgtgcc
gcccctagcacgctgttcgacgataaatccgctaccccgtttgagtcggcggtgtgcgtc
gaagtcctcatatcgcgcgaactcgctgaactgctgaacgacgccgcgctgtatcgcgca
ccgggccgctgggcgtttctctatcgcgtgctctggcgatggcatggcggcgaccgttcg
gtcgcgtcccccgcggattccgacggtgcccggcttcacaagatggcgaaggccgtgcgg
cgcgcgaaacacgacatgatcgcgtacctgcgctttcggctgcgtgatgcgagccacgac
acgcccacacccgacctgcccgaatacgtcgcgtggtacgaaccggaacacgatgtgctc
gcatggtcggccgaacacttcgcgcggcgcatgggtcgttcgacgtggctcatctcgacg
cccgacggcgccgcatggtgggacggcagcgcgctgcgggttgaacgtcgccgggcgccg
tccgccgaccttgcctgcaccaccgccgacgaagccgagagactctggctcgcctactat
cgcaacacgttcaatcccgcgcgcctgaacgaaaccgcgctcgagcagcatatgcctgtg
cgtttctggaagggcttgcccgagggccgtctgattccgtcgctgatcagcgaagcgaaa
agcggcgcgcagcgggtcgcacaggcgagcagcgtgggcatgctcggcggcaagagcgtg
tccgtcgatgcacacagcgcgcaacccatgcggcaacacctttcgacgctcgacgcgtgc
cggcactgcgaactgtggcagcatgcgacgcaggccgtcgacggcatcggccccgacgac
gcgcgcatcatgctgatcggcgaacaacccggcgatcacgaagatctcgcaggaaaaccg
ttcgtcggaccggcaggccggctactcgatgtggcactccagcgcgcgggtctgtcgcgt
gacggtctttatttgaccaacgccgtcaagcacttcaaatggacgctgcgcggcaagcgg
cgtctgcacaagacagcggcgcagcaggaaatcgacgcttgcggctattggctggaacgc
gaactgcaacgcgtgaggcctgccgtcgtcgtcacgctgggcgcgaccgcgttgagcgcg
ctgctgcacgagaaggtcaacctgagcgattggacgggcagaacgctcaatgtggacgac
atgcgggtggtcgcgacgtatcatccgtcgtatgcgttgcggcagcagcatgacgaggcc
cgcgagcgggtgctggcagcgatcatcggggcgctgacgcgggcgcgcgacctgtccgaa
gctgtaggggaaaggcagcacgcgccggactag
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