Paraburkholderia phymatum: Bphy_1363
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Entry
Bphy_1363 CDS
T00704
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bph
Paraburkholderia phymatum
Pathway
bph03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Bphy_1363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bph03400
]
Bphy_1363
Enzymes [BR:
bph01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Bphy_1363
DNA repair and recombination proteins [BR:
bph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Bphy_1363
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACC70545
UniProt:
B2JIF1
LinkDB
All DBs
Position
1:complement(1531024..1532049)
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AA seq
341 aa
AA seq
DB search
MALHESALEELGLAPMWVRRAGAPDAAVDAQASHGDGEVAANVARAAPVASTADAQRPGD
DAAVSGEAQSDSRFSNATSEPAASPESARAEVEAAPGGARQSRRASPPPAPDEAPPFPDD
DFAWFDDLPAGPPSDLEANTSEPVQPGIDTLDWAALEARVSACERCRLCERRTNTVFGVG
DREADWMLIGEAPGENEDKQGEPFVGQAGKLLDNMLRSLGLARGTNVYIANVIKCRPPGN
RNPERDEVARCEPYLQRQVALVKPKLIIALGRFAAQSLLKTEASISSLRGRVYEYEGVPV
VVTYHPAYLLRSLGDKAKSWQDLCLARDMWHKASTEGDAAT
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcatgaatccgcgctggaagaactcggtctcgcgccgatgtgggtgcgccgg
gcgggcgcacctgacgcggcagtcgacgcgcaagcgtcgcatggcgatggcgaagtcgcg
gcgaacgtagcacgggccgcgcccgttgcatcgactgccgatgcccaacggcctggcgac
gacgcggcggtgtcgggcgaagcgcaatcggattcccgcttttcgaacgcaacaagcgag
ccggccgccagccctgaaagcgcacgtgcggaagtcgaagccgcaccgggaggcgcacgt
cagtcgcgccgcgcatcgccgccgcccgcacccgacgaagcaccgcctttccccgacgac
gatttcgcgtggttcgacgatctccctgccggaccgccgtcagatctcgaagcgaatacg
agcgagccggtgcagccgggcatcgacacgcttgactgggccgcactcgaagctcgcgta
tcggcttgcgagcgttgccgtctgtgcgagcggcgcacgaacaccgtattcggcgtcggc
gatcgcgaagccgactggatgctgatcggcgaagcacccggagagaacgaggacaagcag
ggcgaaccgttcgtcggtcaggcgggcaagctgctcgacaacatgctgcgctcgcttggt
cttgcacgcggcacgaatgtgtatatcgcgaacgtgatcaagtgccgaccgcccggaaac
cgcaatccggaacgggacgaagtggcgcgctgcgagccttatctgcagcgccaggtcgcg
ctcgtgaagccgaagctgattattgcgctcggccgcttcgctgcgcagagcctgctgaag
acggaagccagcatttcgtcgctgcgcggacgcgtgtacgagtacgaaggcgtgcctgtc
gtcgtcacctaccatcccgcgtatctgctgcgcagcctcggcgacaaggcgaagtcgtgg
caggacctgtgtctcgctcgcgatatgtggcacaaggcgagtacagaaggggatgctgcg
acatga
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