Paraburkholderia phymatum: Bphy_1389
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Entry
Bphy_1389 CDS
T00704
Name
(GenBank) HhH-GPD family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bph
Paraburkholderia phymatum
Pathway
bph03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Bphy_1389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bph03400
]
Bphy_1389
Enzymes [BR:
bph01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Bphy_1389
DNA repair and recombination proteins [BR:
bph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Bphy_1389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
GREB1_2nd
Motif
Other DBs
NCBI-ProteinID:
ACC70571
UniProt:
B2JIS0
LinkDB
All DBs
Position
1:complement(1561457..1562479)
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AA seq
340 aa
AA seq
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MATATKTPAKRAASQSDAASKVRAVRARSGVSAKGAAKVAVKSASAKGAKAGALARPASV
RSKGNGAEAPEAAVKPSRARTAHLKGNGSLPAELAGDLRELAHDAQEAEPVRKPRAAVAP
AESADAVQAAQPSGVTRPAYWDKACADLVKRDRILKKLIPKFGPVHLSSRADPFVTLARS
VIGQQISVASAQAMWQRIVAACPKLAPQQIIKLGQDDLMGCGVSKRKAEYILDLAHHFVS
GALHVGKWTSMEDEDVIAELTQIRGISRWTAEMFLIFDLSRPDVLPLDDPNLIHAISQNY
FSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDPAPAGN
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggccacgaagacgccggctaaacgggccgcgtctcaatctgacgcggcatct
aaagtaagggctgtgcgtgcgcgaagcggcgtcagcgcgaagggcgctgcgaaggtggca
gtgaaatcggcgtctgcgaagggtgccaaggcgggtgcgctggcgaggcccgcgtcggtg
cgttctaagggcaacggcgccgaggcgcccgaggcggcggtgaagccgtcgcgcgcccgg
actgcgcacttgaaaggcaacggctcgctgcctgccgaactggcgggggacctgcgggag
ctcgcacacgacgcgcaggaagcggagccggtgcgcaagccgcgcgcggcggtggcgcct
gccgaaagcgcggacgcggtgcaggccgcgcagccgtctggcgtcacgcgtcccgcgtat
tgggataaggcgtgcgccgatctcgtcaaacgcgaccgcattctcaagaagctgattccg
aaattcggcccggtgcatctatcgagccgcgccgatccgttcgtcacgctcgcgcgttcg
gtgattggtcaacagatttccgtggcctctgcccaggcgatgtggcagcgtatcgtcgcg
gcatgtccgaagctcgcgccgcagcagatcatcaagctcggtcaggatgatctgatgggc
tgcggcgtgtcgaagcgcaaggccgagtacattctcgatctcgcgcatcacttcgtctcg
ggcgctttacacgtcggcaaatggacgtcgatggaagacgaggacgtgatcgccgagttg
acgcagatccgcggcatcagccgctggacagcggagatgttcctgatattcgacctgtcg
cgtccggacgttctgccgctcgacgatccgaacctgatccacgcaatcagtcagaactat
ttcagcggggaaccggtgacacgcagcgaggcgcgggaagtcgctgcgaactgggagccg
tggcgcaccgtcgcgacctggtatatgtggcgcagcctagacccagcgcctgccggcaac
tga
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