Paraburkholderia phymatum: Bphy_1727
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Entry
Bphy_1727 CDS
T00704
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bph
Paraburkholderia phymatum
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bph03016
]
Bphy_1727
Enzymes [BR:
bph01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Bphy_1727
Transfer RNA biogenesis [BR:
bph03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Bphy_1727
Prokaryotic type
Bphy_1727
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ACC70909
UniProt:
B2JKT2
LinkDB
All DBs
Position
1:complement(1970128..1971057)
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AA seq
309 aa
AA seq
DB search
MTQNQRPKVPRRALDGVLLLDKPVGLSSNDALIRAKRLYLAKKAGHTGTLDPLASGLLPL
CFGEATKFSQDLLEADKTYEATMRLGIRTTTGDAEGEAIETRDVTCDQAAVEQRLVQFRG
DIVQVPPMYSALKRGGKPLYEYARAGQTVEREGRQVTIHALELIACDLPDVTFRVTCSKG
TYVRTLAEDIGEALGCGAHLVMLRRTGVGALTLANSVTLDALSDAAQSERDAWLQPVDAL
LSTFPSVQLDEEATRRFLHGQRLKLTDLAVDDGVLLAAARTRVYGSKGKLLGVAKAADGV
LAPERLIVS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgactcagaaccaacgtcccaaggtgccgcgtcgcgcgctggatggtgtgttgctgctc
gacaagcctgtggggctgtcgagtaacgacgcgctgatccgcgcgaagcgcctgtatctt
gcgaagaaggcggggcacacgggcacgctcgatccgctcgcgtcggggctgttgccgctc
tgcttcggcgaagcaacgaagttttcgcaggatctgctggaagcggacaagacgtatgaa
gcgacgatgcggctcggcattcgcacgacgacgggcgatgccgaaggcgaggcgatcgaa
acgcgcgacgtgacatgcgatcaggctgccgtcgagcagaggctcgtgcagtttcgcggc
gacatcgttcaggtgccgccgatgtattcggcgctcaagcgcggcggcaagccgctgtac
gagtacgcgcgcgccgggcagacggtcgagcgcgaagggcgccaggtgacgattcacgcg
ctggaactcatcgcgtgtgatttgcctgatgtgacttttcgtgtgacgtgcagcaagggt
acgtatgttcgtacgctggccgaggatatcggcgaagcgctcggatgcggggcacatctg
gtgatgttgcggcgtactggcgtcggggcgttgacgctggcgaattcggtgacgctggac
gcgttgtccgatgcggcgcaaagcgagcgtgatgcgtggctgcagcctgtcgatgcgttg
ctgtcgacgtttccttccgttcaactggatgaggaagcgacccggcgatttttgcatggc
caacggttgaagttgaccgatcttgctgtcgacgacggtgttttgctggcggctgctcgt
acgcgcgtgtatggcagcaaagggaaactgcttggcgtcgcgaaagccgccgacggtgtg
ctggcgcccgagcgtctcatcgtgagctag
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