Paraburkholderia phymatum: Bphy_1749
Help
Entry
Bphy_1749 CDS
T00704
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
bph
Paraburkholderia phymatum
Pathway
bph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Bphy_1749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bph03400
]
Bphy_1749
Enzymes [BR:
bph01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Bphy_1749
DNA repair and recombination proteins [BR:
bph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Bphy_1749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ACC70931
UniProt:
B2JKV4
LinkDB
All DBs
Position
1:complement(1995590..1998955)
Genome browser
AA seq
1121 aa
AA seq
DB search
MLQIVYSNQYDVLVGALLDGLAQTPSSPWTAQPVIVPSAAVRRRLELDIAARQGVCANIH
FGYLAQWLWTQIGGVIDVPPRSPFAPDRLVWRCYRLLGDADEARPWNASPRLRSYLDAAD
PPMRYELARRVATVLDHYLTYRPEWLLQWQKGGSIFASGAAADTGPRLTGASAAEREDER
WQGALWRALLVEVAGNAHAPDAATPPAYRFLDEVRSFDLDTIARAEWPGSVSVFALPTMP
PLHIALLRELSRWIDVRLYAMNPCREFWFDIVSAGRVEALDAAGRLDYQEVGHPLLAEWG
RQTQAQLHMLHELTESAASSEASYFAENAAPTWLAAVQNAMLDLRDERDLDTQPAQRGIE
VHVCHSLARQLEVLHDRLLGWFDEFDDLQPADVLVTLPDLGAAGPLIDAVFGTSPAGDTR
RIPYRITGLPPSQANPVARVLLDWLALPERNVGAPELIEWLRVDAIAARYGIDAAALEDV
QEWLAAAGARRGLAPVPAADSAVPVARHTFADALTRLFLGYAMPEGGAPVDAWLPVEGAD
GSDAELLGRLASFVDDVDAFARRCADDMTPVEWTQLLLEVLGRCFDSGVDFADSLAAVRD
AVDAMSEAMRAGAEHLPLPAAVVRTALAEALDDPARGGVPWGTVTFSSLTSLRGLPFRVV
CMLGMDDGVLPSLARADEFDLMAGFGKAGDRQRRDDERNLFLDLLLAAQDRLLIAYTGRS
IRDNAPLPPAALVDELLDHLARVSSAEDASPAELDAARRAFIVEHPLQPFASDYFNAKRA
LFSYDADRAELAALLAEPSSSPVAPFFDVPLPAEQDEPVAFDDFQRFWRHPARALLRDRL
GIVLSDAQGELLDMEPFELDYASRDALADRLLPALLDIDFDGEAFERVRRVAEASPEMPG
GATGAVWRTRELSALRGLADRVRREVASGVTRLPFTLDIDARWPDTGDVALFGRYDDVLR
DRSEGPLRLQGTLNLLTPTGQVVFRYAKPTARDYLSAWLSHLVYCAALPAGPRRTVWHAS
GESFELTPVEHPVDELAALAALFRAGRALPLRFFPKSAWTKISDSDSAAQGGWISDRVRG
ESDDAALRIAYRGAPLTLDEPFGTLATIVFGPLVTHLRSVS
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgctccagattgtctattcgaaccagtacgatgtgctcgtcggcgcgctgctcgacggg
ctcgcgcagacgccttccagtccgtggactgcgcaacctgtgatcgtgccgagtgcggcc
gtgcggcggcgcctcgaactcgatatcgctgcgcgccagggtgtgtgcgcgaatatccac
ttcggctatctcgcgcaatggctgtggacgcagatcggcggcgtgatcgacgttccgccg
cgttcgccgttcgcgcccgaccggctggtatggcgctgctaccgtctgctcggcgacgcg
gacgaggcgcgtccgtggaacgcgtcgccgcgcctgcgcagctacctcgacgccgccgat
ccgccgatgcgctatgaactcgcgcggcgcgtcgcgacggtgctcgaccactatctgacc
tatcgtcccgaatggctgttgcaatggcagaagggcggttcgattttcgcgagcggcgcc
gctgccgacacgggcccgcgtctgacgggcgcgagcgccgccgagcgcgaagacgagcgt
tggcagggcgcgctgtggcgcgcactgctggtcgaagttgcgggcaacgcgcatgcgccg
gacgcggccacgccgcctgcctatcgctttctcgacgaagtccgctcgttcgatctcgac
acgatcgcgcgcgccgaatggccgggttcggtgagcgtgtttgcgctgccgaccatgccg
cccttgcacatcgcgctgctgcgcgaactgtcgcgctggatcgacgtgcgtctgtacgcg
atgaatccgtgccgggaattctggttcgatatcgtcagcgccgggcgcgtcgaagcgctc
gatgctgcgggtcgactcgactatcaggaagtcggccatccgctgctcgcggagtggggc
cggcagacgcaggcgcaactgcacatgttgcacgaactgacggaaagcgcggcgtcgtcc
gaggcgtcgtacttcgcggagaatgccgcgccgacctggctcgccgccgtgcagaacgcg
atgctcgatctgcgcgacgagcgcgatctcgatacgcagcccgctcaacgcggcatcgaa
gtgcatgtctgtcatagcctcgcgcgtcaactggaagtgctgcacgatcgcctgctgggc
tggttcgacgagttcgacgacctgcagcccgccgacgtgctcgtcacgctgcccgatctc
ggcgcggccggtccactgatcgatgccgtgttcggcacgtcgccggcgggcgatacgcgc
cgcattccgtatcggatcaccggcttgccgccttcgcaggcgaacccggtggcccgcgtg
ctgctcgactggctcgcgttgcccgagcgcaatgtcggtgcgccggagctgatcgaatgg
ctgcgtgtcgacgccattgcggcgcgctatggcatcgacgccgccgcgctcgaagacgtc
caggaatggcttgcggcagcgggcgcgcggcgcggcctcgcgcccgtgccggccgccgac
agcgcggttcccgtcgcgcgccacacgttcgccgatgcgcttacgcgtctctttctcggc
tacgcgatgccagaaggcggcgcgcccgttgatgcatggctgcccgtcgaaggcgcggac
ggatcggatgcggaactgcttggccggctcgcgagtttcgtcgacgacgtcgatgccttt
gcgcggcgttgcgcggacgacatgacgcccgtcgagtggacgcagctgttgctcgaagtg
ctcggccgctgcttcgacagcggcgtcgactttgcggacagcctcgccgccgtgcgcgat
gccgtcgacgcgatgagcgaagcgatgcgcgcgggcgccgagcatctgccgttgcccgcg
gccgtggtgcgcactgcgctcgccgaagcgctggacgatcccgcgcgcggcggcgtgccg
tggggcaccgtgacgttttcgtcgctgaccagcctgcgtggcttgccgttcagggtggtg
tgcatgctcggcatggacgatggcgtgctgccaagcctcgcgcgagccgacgaattcgat
ctgatggccgggttcggcaaggcaggcgatcgtcagcgtcgcgacgacgagcgcaatctg
tttctggatctgctgctggccgcgcaggatcggctgctgatcgcctatacggggcgaagc
atccgcgataatgcgccgctgccgcccgccgcgctcgtcgacgaactgctcgatcatctg
gcacgcgtgtcgtcggcagaagacgcgtcgcctgccgaactcgacgcggcgcggcgcgca
ttcatcgtcgagcatccattgcagccgttcgcctccgactacttcaacgcgaagcgtgcc
ctgttcagttacgacgccgaccgcgcggagcttgccgcgttacttgccgaaccgtcaagt
tcgccggttgcgccgttcttcgacgtgccgctgcccgccgaacaggacgaacccgtcgcc
tttgacgacttccagcgcttctggcggcatcccgcgcgcgcgttgctgcgcgaccggctc
ggcatcgtgttgtccgacgcgcaaggcgaactgctcgacatggagccgttcgaacttgac
tacgcaagccgcgatgcgctggccgaccgtctgctgcccgcgctgctcgacattgatttc
gacggcgaagcgttcgaacgcgtgcggcgcgtcgccgaagccagccccgagatgccgggc
ggcgcgacgggcgcggtgtggcgcacacgtgagctctcggcgttgcgcggactcgcggat
cgcgtgcggcgcgaagtggcatcgggcgtcacgcgcctgccgttcacgctcgatatcgac
gcacgctggccggacacgggcgatgtcgcgctgttcggccgctacgacgacgtgctgcgc
gacagatcggaaggtccgctgcgattgcagggcacgctcaatctgctcacgccgacgggg
caggtcgtcttccggtatgcgaaaccgaccgcgcgcgactatctgtccgcgtggctgtcg
catctcgtctactgtgcggcgctgcctgccggaccgaggcgcaccgtatggcacgcaagc
ggcgaatcgttcgaactcacgcccgtcgagcatcccgtggatgaactcgctgcgcttgcc
gcgctgttccgcgccgggcgtgcgttgccgctacgcttcttcccgaagagtgcgtggacg
aagatcagcgacagcgactccgcggctcaaggtggctggatcagcgaccgcgtgcgcggc
gagtccgacgacgcggcgctgcgcatcgcatatcgcggcgcgccgctgacgctcgacgaa
ccgttcggcacgttggccacgatcgtcttcgggccgcttgtcacgcatctgaggagcgtg
tcatga
DBGET
integrated database retrieval system
