Paraburkholderia phymatum: Bphy_2449
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Entry
Bphy_2449 CDS
T00704
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bph
Paraburkholderia phymatum
Pathway
bph00260
Glycine, serine and threonine metabolism
bph00460
Cyanoamino acid metabolism
bph00630
Glyoxylate and dicarboxylate metabolism
bph00670
One carbon pool by folate
bph00680
Methane metabolism
bph01100
Metabolic pathways
bph01110
Biosynthesis of secondary metabolites
bph01120
Microbial metabolism in diverse environments
bph01200
Carbon metabolism
bph01230
Biosynthesis of amino acids
bph01240
Biosynthesis of cofactors
bph04981
Folate transport and metabolism
Module
bph_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Bphy_2449
09102 Energy metabolism
00680 Methane metabolism
Bphy_2449
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Bphy_2449
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Bphy_2449
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Bphy_2449
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Bphy_2449
Enzymes [BR:
bph01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Bphy_2449
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ACC71622
UniProt:
B2JG94
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All DBs
Position
1:complement(2748292..2749539)
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AA seq
415 aa
AA seq
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MFDRAQSTIANVDPEIWNAIQDENRRQEEHIELIASENYTSPAVMAAQGSQLTNKYAEGY
PGKRYYGGCEYVDVVEQLAIDRVKQLFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGM
SLAHGGHLTHGSPVNMSGKWFNVVSYGLNEAEDIDYDAAEKLAQEHKPKIIVAGASAFAL
RIDFERLSKIAKSVGAYLMVDMAHYAGLIAAGVYPNPVPFADFVTTTTHKSLRGPRGGVI
LMKAEFEKQINSAIFPGIQGGPLMHVIAGKAVAFKEALAPEFKEYQQRVVDNARVLAETL
VKRGLRIVSGRTESHVMLVDLRAKKITGKAAEAALGAAHITVNKNAIPNDPEKPFVTSGI
RLGSPAMTTRGFGTKEAEQVGNLIADVLDNPEDTATIERVRAQVAELTQRFPVYR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacagagcccaaagcaccatcgccaacgtcgatcccgagatctggaacgccatc
caggacgaaaaccgccgtcaggaagagcacatcgaactgatcgcgtcggaaaactacacg
agcccggccgtgatggccgcgcagggctcgcagctcaccaacaagtacgccgaaggctac
ccgggcaagcgctactacggcggctgcgaatacgtcgacgtcgtcgagcagctcgcgatc
gaccgcgtgaagcagctgtttggcgctgaagccgcgaacgttcagccgaactcgggctcg
caggccaaccagggcgtgtttttcgcgatgctgaagccgggcgacacgatcatgggcatg
agcctcgcgcacggcggccacctgacgcacggctcgcctgtcaacatgtcgggcaagtgg
tttaacgtggtgagctacggcctgaacgaagccgaagacatcgactacgacgcggccgag
aagctcgcacaggaacacaagccgaagatcatcgtcgcgggcgcatcggcgttcgcgctg
cgcatcgacttcgagcgtctgtcgaagatcgcgaagtcggtcggcgcgtatctgatggtc
gacatggcgcactacgccggcctgattgctgccggcgtctatccgaacccggtaccgttc
gccgacttcgtcaccacgaccacgcacaagagcctgcgcggcccgcgcggcggcgtgatc
ctgatgaaggccgaattcgaaaagcagatcaattcggccatcttcccgggcatccagggc
ggtccgctgatgcacgtaatcgcgggcaaggccgtcgcgttcaaggaagcgctggcgccg
gaattcaaggaataccagcagcgcgtggtcgacaatgctcgcgtgctggctgaaacgctt
gtcaagcgcggtctgcgcatcgtctcgggacgcaccgaaagccacgtgatgctggtcgac
ctgcgcgcgaagaagatcacgggcaaggcagcggaagcggcgctcggcgcggcgcacatc
acggtcaacaagaacgcgattccgaatgacccggaaaagccgttcgtgacgagcggcatc
cgtctcggttcgcccgcgatgacgacgcgcggcttcggtacgaaggaagccgagcaggtc
ggcaacctgattgccgacgtgctggacaaccccgaagacacggcgacgatcgagcgcgtg
cgcgcgcaggtcgccgagctgacgcagcgtttcccggtctaccgctaa
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