Paraburkholderia phymatum: Bphy_2786
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Entry
Bphy_2786 CDS
T00704
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bph
Paraburkholderia phymatum
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bph03016
]
Bphy_2786
Enzymes [BR:
bph01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Bphy_2786
Transfer RNA biogenesis [BR:
bph03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Bphy_2786
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Acb1
Motif
Other DBs
NCBI-ProteinID:
ACC71958
UniProt:
B2JI12
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All DBs
Position
1:complement(3134112..3134756)
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AA seq
214 aa
AA seq
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MQRTERQSDPQAGSGDRDEAELDAARGNGETEAADPQRDYQRCFIALVPDMATRAALSAI
PVPPAARRVPYEQLHLTVTFIGALPLDRSAALIDAVTREAVPLKLAPVARIEHWPGASHP
RLTVATIAMSDEFVALDWRVRSTMIALGLPVDARAFRPHVTLARYRRDAGAVGHAAELPA
GLTARFEALTLYSSTLARNGARYRSLASAPVVYG
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgtaccgaacgtcagtcagatccgcaggccggttcaggcgaccgcgacgaggcg
gagctcgatgccgctcgcgggaacggcgaaacggaagcggccgatccgcagcgcgactac
cagcgctgcttcatcgcactcgtgcccgacatggcgacgcgcgctgcgctgtcggccatt
cccgtgccgcctgccgcgcggcgcgtgccgtacgagcaattgcacctgacggtcacgttc
atcggcgcactgccgctcgacaggagcgctgcgttgatcgacgcggtcacgcgcgaggcg
gtaccgctcaaactcgcgcccgtcgccaggatcgagcattggccgggtgcgtcgcatccg
cgcctgacggtcgcgacgattgccatgtcggacgagtttgtcgccctcgactggcgtgtg
cgctcgacgatgatcgcgctcggtctgcccgtggacgcgcgcgcattcagaccgcatgtc
acgcttgcccgctatcgccgcgatgcgggcgccgtgggtcacgcggcggagttacccgcc
ggactcaccgcgcgcttcgaagcgctgacgctgtactcgagcacgcttgcgcgcaatggc
gcgcgctacaggtccctggcgagcgcgcccgtcgtctacggataa
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