Paraburkholderia phymatum: Bphy_2813
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Entry
Bphy_2813 CDS
T00704
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bph
Paraburkholderia phymatum
Pathway
bph03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Bphy_2813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bph03021
]
Bphy_2813
03400 DNA repair and recombination proteins [BR:
bph03400
]
Bphy_2813
Enzymes [BR:
bph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Bphy_2813
Transcription machinery [BR:
bph03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Bphy_2813
DNA repair and recombination proteins [BR:
bph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Bphy_2813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ACC71985
UniProt:
B2JI39
LinkDB
All DBs
Position
1:complement(3167312..3168289)
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AA seq
325 aa
AA seq
DB search
MQTSLLKPKIIAVESLGESHAKVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VVHEYSTLDGVQEDVVNLLLNLKGVVFKLHNRDEVTVTLRKEGEGVVTAGDIELAHDCEV
INPDHVIAHLSKGGKLDVQIKVEKGRGYVPGNVRRYGEESAKIIGRIVLDASFSPVRRVS
YAVESARVEQRTDLDKLVMNIETNGVISPEEAIRQSARILVDQLSVFAALEGTEAAAEAP
SRAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLDK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccagtttgttgaaacccaagatcatcgcagttgaatcgcttggcgaaagccac
gcgaaagtggtcatggagccgtttgaacgcggctatggccacaccttgggtaacgcgctt
cggcgcgtgttgctgtcgtcgatggtgggctatgcgccgaccgaagtgacgatcgcaggc
gtcgtgcatgaatattcgacgctcgatggtgtgcaagaggacgtggtcaacctgttgttg
aacctgaagggcgtggtgttcaagctgcataaccgcgacgaagtcacggttacgctgcgc
aaggaaggcgaaggcgtcgttacggctggtgacatcgaacttgcacacgactgcgaagtg
attaacccggatcacgtgatcgcgcatctgtccaagggcggcaagctcgacgtgcagatc
aaggtcgaaaaaggccgcggctatgtgccgggcaacgtgcgtcgttacggcgaagagtcg
gccaagatcatcggccgtatcgtgcttgacgcatcgttctcgccggttcgccgcgtcagc
tatgccgtggaaagcgcgcgtgtcgaacagcgtaccgacctcgacaagctcgtgatgaac
atcgaaacgaacggcgtgatctcgccggaagaggcgatccgtcaatcggcgcgtatcctg
gtcgatcagctgtcggtgttcgccgcgctggaaggcacggaagcagcggcagaagcaccg
tcgcgcgctccgcagatcgatccgatcctgctgcgtccggtcgacgatctggaactgacg
gttcgttcggcgaactgcctgaaggccgagaacatttactacatcggcgacctgatccag
cgcacggaaaacgagctgctgaagacgccgaatctgggccgaaagtcgctgaacgagatc
aaggaagtgctcgcttcgcgtggcctgacgctcgggatgaagctcgaaaactggccgccc
gctggtctcgacaagtaa
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