Paraburkholderia phymatum: Bphy_2847
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Entry
Bphy_2847 CDS
T00704
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bph
Paraburkholderia phymatum
Pathway
bph03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Bphy_2847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bph03021
]
Bphy_2847
03400 DNA repair and recombination proteins [BR:
bph03400
]
Bphy_2847
Enzymes [BR:
bph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Bphy_2847
Transcription machinery [BR:
bph03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Bphy_2847
DNA repair and recombination proteins [BR:
bph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Bphy_2847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Peptidase_M23
PYNP_C
Baculo_ME53
Motif
Other DBs
NCBI-ProteinID:
ACC72019
UniProt:
B2JIH3
LinkDB
All DBs
Position
1:complement(3188308..3192549)
Genome browser
AA seq
1413 aa
AA seq
DB search
MKALLDLFKQVQQEEVFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAYVVIDPGMTPLKARQIMTEEDYYNKVEEYGDEFRAEM
GAEGVRELLRAINIDEQVETLRSELKNTGSEAKIKKYAKRLKVLEAFQRSGIKPEWMILE
VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQ
EAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPT
LKLHQCGLPKLMALELFKPFIFNKLEVMGVATTIKAAKKEVENQTPVVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEA
RTLMLASNNVLFPANGDPSIVPSQDIVLGLYYATREAINGKGEGMTFTGVSEVLRAYENK
EVELASRVNVRITEMVHNEDKSEGAPAFVPKISLYATTVGRSILSEILPPGLPFSVLNKP
LKKKEISRLINTAFRKCGLRETVIFADQLMQSGFRLATRAGISICVDDMLVPPQKETIVG
DAAKKVKEYDRQYMSGLVTAQERYNNVVDIWSATSEAVGKAMMEQLSTEPVTDRDGNETR
QESFNSIYMMADSGARGSAVQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSQGVAMKALVEGGEVVEAL
RDRILGRVAVADVVNPETQETLYESGTLLDESAVEEIERLGIDEVRVRTPLTCETRYGLC
ASCYGRDLGRGSLVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSN
GTVRFTATMRYVTNAKGEQIVISRSGEALITDDHGRERERHKVPYGATLLQLDGAQIKAG
TQLATWDPLTRPIITEWGGTVKFENVEEGVTVAKQIDDVTGLSTLVVIDAKRRGSQSSKS
VRPQVKLLDANGEEVKIPNSEHSVQIGFQVGALITVKDGQQVQVGEVLARIPTEAQKTRD
ITGGLPRVAELFEARSPKDAGILAEVTGTTSFGKDTKGKQRLVITDLEGNQHEFLIAKEK
QVLVHDGQVVNKGEMIVDGPADPHDILRLQGIEALSRYIVDEVQDVYRLQGVKINDKHIE
VIVRQMLRRVQITDNGDTRFIPGEQVERSDMLDENDRMNAEDKRPATYENILLGITKASL
STDSFISAASFQETTRVLTEAAIMGKRDDLRGLKENVIVGRLIPAGTGLAFHKARKTKEM
ADRERFDQIAAEEAFEFGTPETPAAEQTPHTNE
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctctgctcgatctattcaagcaagtccaacaggaagaagttttcgacgcgatc
aagatcggtctggcctcgcccgacaagatccgttcgtggtcgttcggcgaagtcaagaag
ccggaaacgatcaactaccgcacgttcaagccggagcgggatggcctgttctgcgcgaag
attttcggtccgatcaaggactacgaatgcctgtgcggcaaatacaagcgcctgaagcac
cgtggcgtgatctgcgagaagtgcggcgtcgaagtgacgctcgcgaaggtgcgccgcgaa
cgcatgggccatatcgaactggcctcgcccgtcgcgcatatctggttcctgaagtcgctg
ccgtcgcgtctgggcatggtgctcgacatgacgctgcgcgacatcgagcgcgtgctgtac
ttcgaagcatatgtggtgatcgatccgggcatgacgccgctaaaggcgcgtcagatcatg
acggaagaggattactacaataaggtcgaagagtacggtgacgagttccgcgctgaaatg
ggcgcggaaggcgtgcgcgaactgctgcgggcgatcaacatcgacgaacaggtcgaaacg
ctgcgttcggagctgaagaacaccggttcggaagcgaagatcaagaagtacgcgaagcgc
ctgaaagtgctcgaggctttccagcgttcgggcatcaagcccgagtggatgattctcgaa
gtgctgcccgtgctgccgccggaactgcgtccgctggttccgctggacggcggccgcttc
gcgacctctgacctgaacgacctgtatcgccgcgtgatcaaccgtaacaaccggttgaag
cgtctgctcgagttgaaggcgcctgaaatcatcgtccgcaacgaaaagcggatgctgcag
gaagccgtcgattcgctgctcgacaacggccgtcgcggcaaggcgatgacgggcgcgaac
aagcgtccgctgaagtcgctggccgacatgatcaagggcaagggcggtcgcttccgtcag
aacctgctgggcaagcgcgtcgactactcgggccgttcggtcatcgtggtcggcccgacg
ctgaagctgcaccagtgcggtctgccgaagctgatggcgctcgaactcttcaagccgttc
atcttcaacaagctggaagtgatgggcgttgcgacaaccatcaaggctgcgaagaaggaa
gtcgagaatcagacgccggtggtgtgggacatccttgaagaggtgatccgcgaacatccg
gtgatgctgaaccgcgcaccgacgctgcaccgtctcggcattcaggctttcgagccggtg
ctcatcgaaggtaaggcaatccagctgcacccgctcgtttgcgccgcgttcaacgccgac
ttcgacggtgaccagatggctgttcacgttccgctgtcgctggaagcgcagatggaagcg
cgcacgctgatgctggcgtcgaacaacgtgctgttcccggccaacggcgatccgtcgatc
gtgccgtcgcaggatatcgtgctcggcctgtactacgcgacgcgtgaagcgatcaacggc
aagggcgaaggcatgacgttcacgggcgtgtcggaagtgctgcgcgcctacgagaacaag
gaagtcgaactggcgtcgcgcgtcaacgtgcggatcacggaaatggtccacaacgaagac
aagtcggaaggcgcgccggcgttcgtgccgaagatttcgctgtacgcgaccacggttggc
cgctcgatcctgtcggaaatcctgccgccgggcctgcccttctcggtgctgaacaagccg
ctgaagaagaaggaaatctcgcgtctgatcaacacggcattccgcaagtgcggtctgcgc
gaaacggtgatctttgccgaccagctgatgcagtcgggcttccgcctggcaacgcgggcc
ggtatttcgatctgcgtcgacgacatgctcgtgccgccgcagaaggaaacgatcgtcggg
gacgccgcgaagaaggtgaaggaatacgaccgtcagtacatgtcgggtctcgtcaccgcg
caggaacgctataacaacgtggtcgacatctggtcggcgacgtcggaagcggtcggcaag
gcgatgatggagcagctgtcgacggagccggtgacggaccgcgacggcaacgaaacgcgt
caggagtcgttcaactccatctacatgatggctgactcgggtgcgcgtggttcggcagtt
cagatccgtcagctggccggtatgcgcggcctgatggcgaagccggacggctcgatcatc
gagacgccgattacggcgaacttccgcgaaggcctgaacgtgttgcagtacttcatctcg
acccacggcgcacgtaagggtctggctgatacggcactgaagacggcgaactccggttac
ctgacgcgtcgtctcgtcgacgtgacgcaggatctcgtcgtggtcgaagacgattgcggc
acgtcgcaaggcgtcgcgatgaaggcgctggtcgaaggcggtgaagtcgtcgaagcactg
cgcgaccgtattctcggccgcgtggctgtggctgacgtcgtcaatccggaaacgcaagag
acgctgtacgaatcgggcacgctgctcgacgaatcggctgtcgaagaaatcgagcgtctg
ggcatcgacgaagtgcgagtgcgcacgccgctcacctgcgaaacgcgttacggtctgtgc
gcatcgtgctatggccgcgacctgggccgtggctcgctggtgaacgtcggtgaagcagtc
ggcgtgatcgctgcacagtcgatcggtgagccgggcacgcagctgacgatgcgtacgttc
cacatcggtggtgcggcatcgcgtgcggcagtggcgtcgtcggtcgaagcgaagtcgaac
ggtaccgtgcgtttcacggcgacgatgcgttacgtcacgaacgcgaagggcgagcagatc
gtcatctcgcgttcgggcgaagcgctgatcaccgacgatcacggccgcgagcgcgagcgt
cacaaggtgccgtacggcgcgacgctgctgcaactcgacggtgcccagatcaaggcaggc
acgcagctggccacgtgggatccgctgacgcgtccgatcatcaccgagtggggcggtacg
gtgaagttcgaaaacgtcgaggaaggcgtgacggtcgcgaagcagatcgacgacgtgacg
ggtctttcgacgttggtcgtgatcgacgcgaagcgccgcggttcgcaatcgtcgaagagc
gtgcgtccgcaggtgaagctgctcgacgcgaacggcgaagaagtcaagatcccgaactcg
gagcactcggttcagatcggcttccaggtcggcgctctgatcaccgtgaaggacggccag
caggttcaggtgggtgaagtgctcgcacgtatcccgactgaagcgcagaagactcgcgat
attacgggtggtctgccgcgtgtggcggaactgttcgaagcacgttcgccgaaggacgca
ggtatcctggcggaagtcacgggtacgacgtcgttcggtaaggacacgaagggcaagcag
cgtctcgttatcacggacctcgagggcaaccagcacgagttcctgatcgcgaaggaaaag
caggttctggtgcatgatggtcaggtcgtcaacaagggcgaaatgatcgtcgacgggccg
gctgatccgcacgacatcctgcgtctgcagggtatcgaagcgctgtcgcgttacatcgtg
gacgaagtgcaggacgtgtaccgactgcagggcgtgaagatcaacgacaagcacatcgaa
gtgatcgtgcgtcagatgctgcgtcgtgtgcagatcacggacaacggcgatacgcgcttc
atcccgggcgaacaggtcgagcggtcggacatgctcgacgaaaacgaccgtatgaacgcg
gaagacaagcgtccggcgacgtacgagaacatcctgctgggtattacgaaggcgtcgctt
tcgaccgattcgttcatctcggcggcatcgttccaggaaacgacgcgcgtgctgacggaa
gctgcgatcatgggcaagcgcgacgatctgcgtggcctgaaggaaaacgtgatcgtgggc
cgtctgattccggccggtacgggtctcgcgttccataaggcgcgcaagacgaaggaaatg
gcggaccgcgagcgtttcgaccagatcgctgccgaagaggccttcgagttcggtacgccg
gaaaccccggctgccgagcaaacgccgcataccaacgagtaa
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integrated database retrieval system
