Paraburkholderia phymatum: Bphy_3303
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Entry
Bphy_3303 CDS
T00704
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bph
Paraburkholderia phymatum
Pathway
bph00260
Glycine, serine and threonine metabolism
bph00460
Cyanoamino acid metabolism
bph00630
Glyoxylate and dicarboxylate metabolism
bph00670
One carbon pool by folate
bph00680
Methane metabolism
bph01100
Metabolic pathways
bph01110
Biosynthesis of secondary metabolites
bph01120
Microbial metabolism in diverse environments
bph01200
Carbon metabolism
bph01230
Biosynthesis of amino acids
bph01240
Biosynthesis of cofactors
bph04981
Folate transport and metabolism
Module
bph_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Bphy_3303
09102 Energy metabolism
00680 Methane metabolism
Bphy_3303
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Bphy_3303
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Bphy_3303
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Bphy_3303
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Bphy_3303
Enzymes [BR:
bph01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Bphy_3303
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
ACC72459
UniProt:
B2JS82
LinkDB
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Position
2:complement(234348..235622)
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AA seq
424 aa
AA seq
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MSNANPFFSQSLAERDAAVRKSVLKELERQQSQVELIASENIVSRAVLEAQGSVLTNKYA
EGYPGKRYYGGCEFVDEVEALAIERIKKLFNAGFANVQPHSGAQANGSVMLALAKPGDTI
LGMSLDAGGHLTHGAKPALSGKWFNAVQYGVNRETMRVDYDQIEKLAHEHKPSMLIAGFS
AYPRELDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRGPR
GGFVLTNDEEVAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALEDSFKTYIDNVLANAQA
LGEVLKEGGVDLVTGGTDNHLLLVDLRPKGLKGTQVEQALERAGITCNKNGIPFDTEKPT
VTSGIRLGTPAGTTRGFGVAEFRDVGRMILEVFDALRSHPDGDAATEQRVRREIFALCER
FPIY
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgccaacccattcttctcgcagtccctcgccgagcgcgacgcagcggtgcgc
aagtcggtcctcaaggaactggaacgccagcagtcgcaggtcgaactgattgcgtcggaa
aacatcgtgtcgcgtgccgtgctcgaagcacaaggctcggtactgacaaacaagtacgcg
gaaggctatcccggcaagcgctattacggcggctgtgaattcgtcgacgaagtcgaagcc
cttgcgatcgaacgcatcaagaagctcttcaatgcgggcttcgccaacgtgcagccgcac
tcgggcgcacaggcgaacggttcggtgatgctcgcgctcgccaagccgggcgacacgatc
ctcggcatgtcgctcgacgcgggcggccacctcacgcacggtgcgaagcccgcactctcg
ggcaagtggttcaacgctgtgcagtacggcgtgaaccgcgaaacgatgcgtgtcgactat
gaccagatcgaaaagctcgcgcatgagcacaagccgtcgatgctcattgccggcttctcc
gcttatccgcgcgaactcgactttgcacgctttcgtgccatcgccgacagcgtcggcgcg
aagctgatggtcgacatggcgcatatcgccggcgtgatcgcggcgggccgtcatgcgaat
cccgtcgagcacgcgcatgtcgtgacgtcgaccacgcacaagacgctgcgtggtccgcgc
ggcggcttcgtgctgaccaacgacgaagaggtcgcgaagaagatcaactcggccgtattc
cccggcctgcaaggcggtccgctcatgcacgtgatcgcgggcaaggcggttgctttcggc
gaagcgctcgaagacagcttcaagacctatatcgacaacgtgctggccaatgcgcaagcg
ctgggcgaagtgctgaaggaaggcggtgtcgatctcgtgacgggcggcaccgacaaccat
ctgctgctcgtcgatctgcgcccgaaggggctgaagggcacacaggtcgagcaggcgctc
gaacgggcgggcattacctgcaacaagaacggcatcccgttcgatacggaaaagccgacg
gtgacgtcgggcattcgtctcggcacgccggcgggcacgacgcgcggcttcggcgtcgcc
gagttccgcgatgtcggccggatgattctcgaggtgttcgacgcgctgcgctcgcatccc
gacggcgatgccgccaccgagcagcgcgtgcgccgcgagatcttcgcgctgtgcgaacgc
ttcccaatttactga
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