Paraburkholderia phymatum: Bphy_3331
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Entry
Bphy_3331 CDS
T00704
Name
(GenBank) sarcosine oxidase, alpha subunit family
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
bph
Paraburkholderia phymatum
Pathway
bph00260
Glycine, serine and threonine metabolism
bph01100
Metabolic pathways
Module
bph_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Bphy_3331
Enzymes [BR:
bph01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
Bphy_3331
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
Bphy_3331
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
Pyr_redox_3
FAD_binding_2
NAD_binding_8
Pyr_redox
DAO
GIDA
NAD_binding_7
FAD_binding_3
HI0933_like
Thi4
AlaDh_PNT_C
XdhC_C
AdoHcyase_NAD
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
ACC72487
UniProt:
B2JSB0
LinkDB
All DBs
Position
2:complement(265809..268808)
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AA seq
999 aa
AA seq
DB search
MSQKNRLGAGGRINRAIPLTFTFNGRTYQGFQGDTLASALLANGVHFVARSFKYHRPRGI
VTADVAEPNAVVQLERGAYTVPNARATEIELYQGLVATSVNAEPNLEHDRMAINQKFARF
MPAGFYYKTFMWPAKWWPKYEEKIREAAGLGKAPEVLDADRYDKCYAHCDVLVVGGGPTG
LAAAHAAASSGARVILVDDQRELGGSLLSCKTEIDGHAALSWVEKIEAELSRMPDVKILS
RSTAFGYQDHNLVTVTQRLTDHQPVSMRKGTRELLWKIRAKRVILATGAHERPIVFGNND
LPGVMLASAVSTYIHRFGVMPGRNAVVFTNNDAGYRCALDMKACGASVTVVDPRAQGNGA
LQAAARRHGVKIMNNAAVMTAHGKQRVTSVEVVAYANGKTGAKQADLQCDLVAMSGGFSP
VLHLFAQSGGKAHWNDTKACFVPGKGMQPETSVGAAAGEFSLARGLRLAVDAGVEAVKSI
GYAVTRPQVPQVAEVVESPLQPLWLVGSRAEAARGPKQFVDFQNDVSAADILLAAREGFE
SVEHVKRYTAMGFGTDQGKLGNINGMAILADALGKTIPETGTTTFRPNYTPVTFGTFAGR
ELGDLLDPIRKTAVHEWHVENGAMFEDVGNWKRPWYFPLKGEDLHAAVKRECLAVRNSVG
ILDASTLGKIDIQGPDAAKLLNWMYTNPWSKLEVGKCRYGLMLDENGMVFDDGVTVRLAD
QHFMMTTTTGGAARVLTWMERWLQTEWPDMKVRLASVTDHWATFAVVGPKSRKVVQKVCS
DIDFANEAFPFMSYRNGTVAGVKARVMRISFSGELAYEVNVPANMGRAVWEALMAAGAEF
DITPYGTETMHVLRAEKGYIIVGQDTDGSVTPHDLGMGGLVAKTKDFLGRRSLARSDTTK
DNRKQFVGLLSDDPQFVIPEGSQIVARPFQGDTAPMLGHVTSSYYSPILNRSIALAVVKG
GLNKMGQSVTIPLSSGKQIAAKIASPVFYDTEGVRQHVE
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaagaaccgcctcggcgccggtgggcgcatcaaccgcgcgattccgctgacc
ttcacgttcaacggccgcacgtatcaaggctttcagggcgacacgctggcgtccgcgcta
ctcgcgaacggcgtgcacttcgtcgcgcgcagcttcaagtatcaccggccgcgcggcatc
gtcacggccgacgtcgccgaaccgaatgccgtcgtgcaactcgaacgcggcgcctacacg
gtgccgaatgcccgtgcgacggaaatcgagctgtatcagggcctcgttgcgacgagcgtg
aacgccgagccgaacctcgagcacgatcgcatggccatcaatcagaagttcgcgcgcttc
atgcccgcgggcttttactacaagaccttcatgtggccggccaaatggtggccgaagtat
gaagagaagatccgcgaagcggcgggtctcggcaaggcgcccgaagtgctcgacgccgac
cgttacgacaagtgctacgcgcattgcgacgtgctcgtcgtgggcggcgggccgacgggt
ctcgcggcggcgcatgcggcggcctcgagcggcgcgcgtgtgatcctcgtcgatgaccag
cgcgaactcggcggcagcctgctgtcgtgcaagacggagatcgacgggcacgcggcgctg
agctgggtcgagaagatcgaggcggaactatcgcgcatgcccgacgtgaagatcctttcg
cgcagcacggcattcggctatcaggatcacaacctcgtcacggtgacgcagcgactgacg
gatcatcagcccgtgtcgatgcgcaagggcacgcgcgaactgctgtggaagatccgcgcc
aaacgcgtgatcctcgcgacgggcgctcacgagcgtcccatcgtgttcggcaacaacgat
ctgccgggtgtgatgctggcgtcggccgtgtcgacgtatatccatcgcttcggcgtgatg
ccggggcgcaacgccgtcgtgtttaccaacaacgacgccgggtatcgctgcgcgctcgac
atgaaagcgtgcggcgcgagcgtcaccgtcgtcgacccgcgtgcgcaaggcaacggcgca
ttgcaggcagccgcgcgccgtcacggcgtgaagatcatgaacaacgccgccgtgatgacc
gcacatggcaagcagcgcgtgacgtccgtggaagtcgtcgcgtatgcgaacggcaagacg
ggcgcgaagcaggctgatctgcagtgcgatctcgtcgcgatgtcgggcggtttcagcccg
gtgctgcacctgttcgcgcagtcgggcggcaaggctcactggaacgatacgaaggcgtgc
ttcgtgccgggcaagggcatgcagccggaaacgagcgtcggcgcagcggcgggcgaattc
agccttgcacgcggcctgcgtcttgccgtcgatgccggcgtcgaagccgtcaagtcgatc
ggttatgcagtgacgcgtccgcaggtgccgcaggtggccgaggtcgtcgagtcgccgctg
caaccgctgtggctcgtcggcagccgggcagaagcggcgcgcggtccgaagcagttcgtc
gacttccagaacgacgtgtcggcggcggatattctgcttgcggcgcgcgaaggcttcgaa
tccgtcgagcacgtgaagcgctatacggcgatgggcttcggtacggatcagggcaagctc
ggcaacatcaacggcatggcgattctcgcggatgcgctcggcaagacgattcccgaaacg
ggcacgacgacgttccgtccgaactacacgcccgtgaccttcggcacgttcgcgggccgc
gagctcggcgatcttctcgacccgatccgcaagacggccgtgcacgaatggcacgtcgag
aatggcgcgatgttcgaggacgtcggcaactggaagcgtccgtggtacttcccgctgaag
ggcgaagacctgcatgcggccgtcaagcgcgaatgccttgcggtacgcaacagcgtcggc
attctcgatgcatcgacgctcggcaagatcgacattcagggcccggatgcggcgaagctg
ctgaactggatgtacacgaacccgtggagtaagctcgaagtcggcaagtgccgctacggc
ctgatgctcgacgagaacggcatggtgttcgatgacggcgtgacggtgcgcctcgccgac
cagcacttcatgatgacgaccacgacgggcggcgcggcgcgagtgctgacatggatggag
cgctggctgcagacggaatggccggacatgaaggtgcgcctcgcatccgtgaccgatcac
tgggcgaccttcgccgtggtcggcccgaagagccggaaggtcgtgcagaaggtgtgcagc
gacatcgacttcgccaacgaagcgttcccgttcatgtcgtaccgcaacggcacggtggcg
ggtgtgaaggcgcgtgtgatgcgcatcagcttctcgggcgaactggcgtatgaagtgaac
gtgcccgcgaacatgggccgcgcggtatgggaggcgctgatggccgcgggcgccgaattc
gatatcacgccctacggcacggaaacgatgcacgtgctgcgcgcggagaagggctacatc
attgtcggccaggatacggacggttccgtcacgccgcacgatctgggcatggggggcctg
gtcgcgaagaccaaggacttcctgggacgccgttcgcttgcgcgttcggatacgacgaag
gataaccgcaagcagttcgtcggcctgctgtccgacgatccgcagttcgtgattcccgaa
ggcagccagatcgtcgcgcgtccgttccagggcgacaccgcgccgatgctcggacacgtg
acgtccagctactacagcccgattctgaatcgatcgatcgcgctcgccgtggtcaagggc
ggcctgaacaagatggggcaaagcgtgacgattccgctgtcgagcggcaagcagatcgcc
gcgaagatcgccagccccgttttctacgacaccgaaggagtgcgtcaacatgtggaatga
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