Paraburkholderia phymatum: Bphy_3950
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Entry
Bphy_3950 CDS
T00704
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
bph
Paraburkholderia phymatum
Pathway
bph03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Bphy_3950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bph03400
]
Bphy_3950
Enzymes [BR:
bph01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Bphy_3950
DNA repair and recombination proteins [BR:
bph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Bphy_3950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Motif
Other DBs
NCBI-ProteinID:
ACC73073
UniProt:
B2JP70
LinkDB
All DBs
Position
2:complement(923045..923362)
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AA seq
105 aa
AA seq
DB search
MAKTASTDTAGLSPTSAEGSDNSPLPESYEAALAELEGLVGRMEGGSLNLEESLSAYRRG
AVLVAFCQQQLEKVEQQVRVLDGETLKPLPVNTAGTTAGDSADDL
NT seq
318 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagacggcttcgaccgatacggctggtttgtcccccaccagcgcggaaggttcc
gacaactcaccgctgcccgagagctacgaggcggcgctggcggaactggaagggctcgtc
gggcgcatggagggcggcagcctcaacctggaagagtcgctgtcggcttaccggcgcggc
gccgtcctcgtggcgttctgccagcaacagctcgagaaagtggagcagcaagtgcgcgtc
ctcgacggcgagacgctcaagccgcttcccgtgaacacagcaggtacaaccgctggcgac
agcgcagacgatctatga
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