Paraburkholderia phymatum: Bphy_4419
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Entry
Bphy_4419 CDS
T00704
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bph
Paraburkholderia phymatum
Pathway
bph03030
DNA replication
bph03410
Base excision repair
bph03420
Nucleotide excision repair
bph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bphy_4419
03410 Base excision repair
Bphy_4419
03420 Nucleotide excision repair
Bphy_4419
03440 Homologous recombination
Bphy_4419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bph03032
]
Bphy_4419
03400 DNA repair and recombination proteins [BR:
bph03400
]
Bphy_4419
Enzymes [BR:
bph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bphy_4419
DNA replication proteins [BR:
bph03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Bphy_4419
DNA repair and recombination proteins [BR:
bph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Bphy_4419
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bphy_4419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
ACC73533
UniProt:
B2JQJ2
LinkDB
All DBs
Position
2:1455937..1458684
Genome browser
AA seq
915 aa
AA seq
DB search
MPEEQNLDGKTLLLVDGSSYLYRAYHAMPDLRGPDGGPTGALYGIINMLRRMRKEVTAEY
SACVFDAKGKTFRDDWYPQYKANRPSMPDDLARQIEPIHVAVRSLGWPLLMIDGVEADDV
IGTLAKRAEARGMNVIVSTGDKDLAQLVTDHVTLINTMTNEKLDREGVVAKFGVPPERIV
DYLSLIGDTVDNVPGVEKCGPKTAIKWLTQFGTLDGIVAHADEIKGAVGDNLRRALHFLP
MARKLVTVETDCDLTEHVTSFADTLPTRPESREELRDVFTRHGFKTWLREVEVADAVEGP
ETDVPPAPTVEGDGAREYDTVQTWEQFDAWLEKIDHAEITSFDTETTSLDPMVAQIVGIS
IAVEAGKAAYIPVAHHGPDAPVQLPRDEVLAKLKPWLESRDKKKVGQHLKYDEQVLANYG
ITMDGIEHDTLLQSYVLESHRPHDMDNLALRHLGLKTIKYEDVAGKGASQIGFDEVALDK
ASEYAAEDADITLRLHQTLYPQIASEVPLDHVYRNIEVPTSRVLRKMERNGVLIDVEKLR
VQSNEIATRLVELERQAYDLAGGEFNLGSPKQIGQIFFEKLELPVVKKTPSGAPSTDEEV
LQKLAEDYPLPKTILEHRGLSKLKSTYTDKLPRMVNASTGRVHTNYAQAVAVTGRLASND
PNLQNIPVRTGEGRRIREAFIAPPGHKLVSADYSQIELRIMAHISGDEALLRAFKQGEDI
HRATASEVFSVTPLEVSNDQRRIAKVINFGLIYGMSSFGLASNLGITRDAAKLYIDRYFA
RYPGVAAYMENTRTSAKMKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGTAA
DLIKLSMIAVQKWIEESGIRTRMIMQVHDELVLEVPDDELSDVRKRLPELMCGVAQLKVP
LVAEVGAGANWEEAH
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaacagaacctggatggtaagaccctgctattggttgacggttcgagttat
ctgtaccgggcctaccatgcgatgcctgatttgcgcggtcccgatggcgggccaacgggg
gcgctctacgggatcatcaacatgctgcgccgtatgcgcaaggaggttacggcagagtat
agcgcgtgcgtgttcgatgccaaaggcaagacgtttcgcgacgactggtatccgcaatac
aaggcgaaccgtccgtcgatgcccgacgatctcgcgagacagatcgagccgattcacgtc
gccgtgcgctcgctcggctggccgctcctgatgatcgacggcgtcgaagccgacgacgtg
atcggcacgcttgcgaagcgcgcggaagcgcgcggcatgaacgtgatcgtatccactggg
gacaaggatctggcgcagctcgtgacggatcatgtcaccctcatcaatacgatgacgaac
gagaagctcgaccgcgaaggcgtcgtggcgaagttcggcgtgccgcccgagcgcatcgtc
gattacctgtcgctgatcggcgataccgtcgacaacgtgcccggcgtggagaaatgcggt
ccgaaaacggcgatcaaatggctcacgcaattcggcaccctcgatggcatcgtcgcacat
gcagatgaaatcaaaggtgcggtaggagacaatctgcggcgcgcgctccactttctccct
atggcgagaaagctcgtcacggtcgaaacggattgcgatctgacggaacatgtgacctcg
ttcgcggatacgctcccgacgcggcccgagtcgcgcgaagaactgcgcgacgtgttcacg
cgtcatggcttcaagacgtggctgcgtgaagttgaagtcgccgatgccgtcgaaggcccc
gagaccgacgtgccgcccgcgcccaccgtggaaggcgacggcgcgcgcgaatacgacacc
gtgcagacctgggaacagttcgacgcgtggctcgaaaaaatcgatcatgccgagatcacc
tcgttcgatacggaaacgacgtcgctcgatccgatggtcgcgcagatcgtcggcatttcg
attgccgtcgaagcgggcaaggctgcgtatattcccgtcgcgcatcacgggccggatgcg
cccgtccagttgccgcgcgacgaagtgctcgcgaagctcaagccgtggctcgaaagccgc
gacaaaaagaaggtcggccagcatctgaagtacgacgagcaggtactcgcgaactacggc
attacgatggacggcatcgagcacgacacgctgttgcagtcgtacgtgctcgagtcgcat
cgtccgcacgacatggacaacctcgcactgcgtcatctcggtcttaagacgatcaagtac
gaggatgtggcgggcaagggcgcgtcgcagataggtttcgacgaagtggcgctcgacaag
gcttccgaatacgcagcggaagatgccgacatcacgttgcgtttgcatcagacgctgtat
ccgcagatcgcttccgaagtgccgctcgatcacgtgtaccgcaacatcgaagtgccgacg
tcgcgtgtgctgcgcaagatggagcgcaacggcgtgctgatcgacgtcgaaaagctgcgc
gtgcaaagcaacgagatcgcgacgcgtctcgtcgaactggagcggcaggcgtatgacctc
gcgggcggcgaattcaatctcggctcgccgaagcagatcggccagattttcttcgagaag
ctcgaactgcccgtcgtgaagaagacgccgagcggcgcgccttccaccgacgaagaggtg
ctgcaaaagcttgcggaagactatccgctgccgaagacgatcctcgagcaccgcgggctg
tcgaagctgaagtcgacctacaccgacaagcttccgcgcatggtcaacgcgagcacgggc
cgcgtgcatacgaactatgcgcaggccgtcgcggtgacggggcgcctcgcatcgaacgat
ccgaatctgcagaacattcccgtgcgcacgggcgaaggccggcgcattcgcgaggcgttc
atcgcgccgccgggacacaagctcgtgtcggccgactactcgcagatcgagttgcgcatc
atggcgcacatctccggcgacgaagcgctgttgcgtgcgttcaagcagggcgaagacatc
caccgcgccacggcttcggaagtgttcagtgtgacgccgctcgaagtgtcgaacgatcag
cggcgcatcgcgaaggtgatcaacttcggcctgatctatgggatgagttcgttcgggctc
gcgtccaacctgggcatcacgcgcgatgcggcgaagctgtatatcgaccgctatttcgcg
cgttacccgggcgtggccgcatacatggaaaacacgcgcaccagcgcgaaaatgaagggc
tacgtcgaaacggtgttcggccgccggctgtggctgcccgagatcaacggcggcaacggc
ccgcgccgccaggctgcggaacgtgcggcgatcaacgcgccgatgcagggtacggccgcc
gacctgatcaagctgtcgatgatcgcggtgcagaagtggatcgaagaatcgggaatccgc
acgcgcatgatcatgcaggtacacgacgagttggttctcgaagtgccggacgacgaactc
tccgacgtgcgcaagcgcttgccggaactgatgtgcggtgttgcgcaactgaaggtgccg
cttgtcgccgaagtgggcgcaggcgcgaactgggaggaagcgcactga
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