Paraburkholderia phymatum: Bphy_4534
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Entry
Bphy_4534 CDS
T00704
Name
(GenBank) transcriptional regulator, IclR family
KO
K05818
IclR family transcriptional regulator, mhp operon transcriptional activator
Organism
bph
Paraburkholderia phymatum
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bph03000
]
Bphy_4534
Transcription factors [BR:
bph03000
]
Prokaryotic type
Helix-turn-helix
IclR family
Bphy_4534
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_IclR
IclR_C
MarR_2
HTH_29
HTH_24
MarR
HTH_5
HTH_23
HTH_Crp_2
TrmB
HTH_11
Dimerisation
HTH_20
MksE
DUF7342
Rrf2
DUF7343
TFIIE_alpha
wHTH-PRTase_assc
HTH_28
DUF977
HTH_AsnC-type
DUF4423
HTH_Cmi2_C
FaeA
Crp
HTH_27
AbiEi_4
HTH_36
HTH_17
SMC_Nse1
DUF2250
Xre-like-HTH
RepL
Put_DNA-bind_N
HTH_65
HTH_9
Rio2_N
HTH_45
Motif
Other DBs
NCBI-ProteinID:
ACC73646
UniProt:
B2JQV5
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Position
2:complement(1592164..1593054)
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AA seq
296 aa
AA seq
DB search
MGGRKRPQQNLRNVHTMHIVELKRFSGVTTYTNVRGLARGLQVLRALNAVEGGRATSQQI
ADLTGLHRTTVRRLLETLMEEGFVRRSTSDDSFRLTLAVRTLSEGFTDTERIATVAPPIM
GQLLQRVAWPSDLTTPDGDAMIIRETTHRFSQLSFHRAMVGRRLPILLTAAGRAYFAMCP
DEEREDILELLRSGAGGEEQQALAKNDALVRKLIRRVREDGFGSNHGDWTAQAKIGAVAV
AISADDRVLASLNVVFLSRAVGLADATRRYVPELQKAAKEIATALKQEPQLSPIHR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcagaaaacgccctcaacaaaatctccgaaatgtgcatacaatgcacattgtt
gaattaaaaaggttttccggtgtgacgacctacactaacgtgcgcggactggcgcgcggc
cttcaggtattgcgggcactgaacgccgtggaaggcggacgggcaacgagtcagcagatc
gccgatctgaccggcctgcatcgcacgacggtgcgacgcttgctcgaaacgttgatggag
gaagggttcgtgcgccgcagtacgtccgacgacagcttccgtctgacgctcgccgtgcgc
acattgagcgaaggcttcaccgatacggagcggatcgcgaccgtggcgccgcctatcatg
gggcagctcctgcagcgcgtcgcgtggccatccgatctgaccacgcccgacggcgacgcg
atgatcatccgcgagacgacgcatcgctttagccagttgtcgtttcatcgcgcgatggtc
gggcggcgattgccgatcctgctgacggcagcgggccgcgcctacttcgcgatgtgtccc
gacgaggagcgcgaggacattctcgagctgctgcgctcgggcgcgggcggcgaagagcag
caggcgctagcgaagaacgatgcgctcgtgcgcaagctgatccggcgcgtgcgcgaggat
ggtttcggatcgaatcacggcgactggaccgcgcaggcgaagatcggtgcggtggccgtc
gcgatcagcgcggacgatcgcgtgctcgcgagcctcaatgtcgtcttcctctcgcgcgcg
gtgggccttgcggacgccacgcggcgctatgtgcccgagttgcaaaaagcggcgaaagaa
attgcgacagcattgaagcaagaaccacaactctcgcccatccatcggtga
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