Paraburkholderia phymatum: Bphy_4848
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Entry
Bphy_4848 CDS
T00704
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bph
Paraburkholderia phymatum
Pathway
bph00061
Fatty acid biosynthesis
bph00071
Fatty acid degradation
bph01100
Metabolic pathways
bph01212
Fatty acid metabolism
bph02024
Quorum sensing
bph04146
Peroxisome
Module
bph_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Bphy_4848
00071 Fatty acid degradation
Bphy_4848
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Bphy_4848
09145 Cellular community - prokaryotes
02024 Quorum sensing
Bphy_4848
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bph01004
]
Bphy_4848
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bph04147
]
Bphy_4848
Enzymes [BR:
bph01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Bphy_4848
Lipid biosynthesis proteins [BR:
bph01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Bphy_4848
Exosome [BR:
bph04147
]
Exosomal proteins
Exosomal proteins of breast milk
Bphy_4848
Exosomal proteins of breast cancer cells
Bphy_4848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF2178
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ACC73954
UniProt:
B2JSD4
LinkDB
All DBs
Position
2:1913457..1914953
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AA seq
498 aa
AA seq
DB search
MLTADIEAHALRDSARVAIRSGTEVLQYGELIRKVDRFVDSLRGAGVDSRHTVASLCDNR
IEVLLLYYAMGKIGGTFISINQSLTAPEVAYILGHAEVSLLLHDERMELVAKKAAEDQDT
VQVTTFEELIAAGSTSQVSTIGQMADNFMVAYTSGSTGRPKAVAFDQRSEVAGNRSLIEM
WGMTPSDITLVALPLGFMYGLSTAASMTLQAGGEVVLLRRFHPREVLEALISHKATVFHG
VPTMFAMMLEYAEQNSVEVDLSFMRLLVSAGAPLSRELCARFEAKFGKRIDDYYGLTEVR
PVFGRYWNDSSPVPASAIGKAAPGVIVRIVDSNGNDVEQGETGEILVRAPSTTRGYFKNP
ELTESVFTGDGLLKTGDLGYRDTDGYYHLTGRIKDIIIRGGANIAPAEVEETIESHPDAK
AVAVIGVPDEKFGQIVVAYVVPRECNHASEDEVREFCKGRLADFKVPAQIIWSEELPLGI
TGKVDKKALLARWSECHV
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgttgacagcggacatcgaagcgcatgcgttgcgcgactcggcacgtgtggcgattcgg
agcggaacggaagttctgcaatatggagaactgatacgaaaagttgaccgctttgtcgac
agtttaagaggcgcgggagttgatagtcgccacaccgttgcatcgctttgtgacaatcgt
attgaagttctcctcctttactacgccatgggcaagattgggggtacgtttatctcaatc
aaccaaagtctaacggctcccgaagttgcatacatcctggggcatgcggaggtgtcgtta
ctgctgcatgatgagaggatggaactggttgcaaagaaggcagctgaagatcaggacacg
gtccaggtaacaacattcgaagagctcattgcggcagggtccacttcgcaagtgtccacc
ataggtcagatggcggacaactttatggtggcgtacacgtccggttctactggccggccc
aaagccgtggcattcgaccaaaggtccgaagtcgcggggaatcgctccctcatcgaaatg
tggggaatgacgccgtccgatataacattggttgcattgccactgggctttatgtatggg
ttgtcgactgcggcgtcgatgactctgcaggccggaggcgaagttgttctgttgagacgc
tttcatccgcgcgaggtacttgaggctttgatcagccataaagccactgtcttccacggc
gtgccaacgatgtttgcaatgatgcttgagtacgcggagcagaacagtgtagaagttgat
ctgtctttcatgaggttgctggtttcagcaggggcgccactatcccgtgagctttgcgcc
cgattcgaggcgaaattcggcaagagaattgacgactactacggcctgacagaggtccgt
cctgttttcgggcgatactggaacgattcttctccagtacctgcaagcgccatcggtaag
gcggcgccgggcgtcattgtaagaattgttgattccaatggtaacgacgttgagcaaggc
gaaacgggtgaaattctcgttcgcgcaccatccacgactcgtggctatttcaagaatccg
gaactgacggagagtgttttcacgggagatggcctccttaagacgggagatctgggctat
cgagacaccgacggctactaccaccttacaggtcgtattaaggacattattattcgtggc
ggagcaaacatcgctccagcggaggttgaagagacaatcgagagccacccggatgcgaaa
gctgttgccgttattggcgttccggacgagaaatttggccagatcgttgtcgcttacgtc
gtcccacgtgagtgcaaccacgcttctgaagatgaagtgagggaattctgcaaaggtcgg
ctggctgactttaaggtccccgcccaaatcatctggtcggaagagttgccgttaggcata
acaggcaaggtggacaaaaaggcactacttgcgcgctggagtgaatgccacgtgtaa
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