Paraburkholderia phymatum: Bphy_4871
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Entry
Bphy_4871 CDS
T00704
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bph
Paraburkholderia phymatum
Pathway
bph00061
Fatty acid biosynthesis
bph00071
Fatty acid degradation
bph01100
Metabolic pathways
bph01212
Fatty acid metabolism
bph02024
Quorum sensing
bph04146
Peroxisome
Module
bph_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Bphy_4871
00071 Fatty acid degradation
Bphy_4871
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Bphy_4871
09145 Cellular community - prokaryotes
02024 Quorum sensing
Bphy_4871
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bph01004
]
Bphy_4871
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bph04147
]
Bphy_4871
Enzymes [BR:
bph01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Bphy_4871
Lipid biosynthesis proteins [BR:
bph01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Bphy_4871
Exosome [BR:
bph04147
]
Exosomal proteins
Exosomal proteins of breast milk
Bphy_4871
Exosomal proteins of breast cancer cells
Bphy_4871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ACC73976
UniProt:
B2JSF6
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All DBs
Position
2:1947295..1948815
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AA seq
506 aa
AA seq
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MEQSVGALITSSARKFGDKTALVIGGESWSFLQLDCFSSNVAKSLEQRGVGKGSVVSLYS
PNCAQWIIAYYAILKLGAVVNPLNLMLTSSEAAYAVSDCKAVAVLGSLEKLVPLREALGI
NQVRLISFGTATGSIECFNDLLSGDGTDHYPVSAIELDDLCTIGYTSGTTGHPKGAMLSH
RAILLNTAMTSTYHVRTDRDIVVSALPCSHVYGNIVMNCAVACGMTLVLHAVFDAKAILA
SIEAYRATIFEGVPTMYMYLLNLPELADYDVSTLTRCTVGGQTMPPQKMEEVERKFGSPL
LELWGMTELGGLGATHPLYGPKKNGSIGVPLPLLKARIASLESPSKEVTAREVGELQMKG
PITMMGYYGRPEATLETIDADGWLHTGDLAYIDEEGFIFIVDRLKDMVITGGFNIYPAEL
ERVLCEHPSIALAAVVGVPDDIKGELAKAFIVRKHGAEIRTEDVFEFCRQRLAAYKVPRL
IEFVEDLPKTNSGKILRRELRKKALQ
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggagcaatctgtcggggcacttataacaagttccgcccgaaagttcggtgacaagacg
gcgttggttatcggcggagaaagctggtcgtttcttcaactggactgcttttcctcaaat
gtggcgaagagcctggagcagcgtggcgttggaaagggttctgtcgtctcgctgtattcc
ccaaattgtgcgcaatggatcatcgcctattatgcgatcctgaaattgggtgcagtcgtc
aaccccttaaatctgatgcttacgtcgtctgaggcagcgtatgcggtgagcgactgcaag
gccgtcgctgtgttaggttccttggaaaaactggttccattgagagaggcacttgggatc
aaccaagtcaggctgatctcattcggaactgcaacggggtcgattgaatgtttcaacgac
ctgctttctggagatggaacagaccattatccagtaagcgcgattgaactcgatgaccta
tgcaccattggctacacgtcgggaacgaccggccaccctaaaggtgccatgctgtcgcat
cgcgcaatccttctaaacaccgcgatgacatcgacataccatgtacgtactgatcgcgat
atcgttgtcagcgcactaccatgttcgcacgtctatggcaatattgtcatgaactgtgct
gtcgcgtgcgggatgactcttgtactgcacgctgtctttgatgcgaaagcgattctcgcg
agtattgaggcctatcgggcgacgatattcgagggcgtgccgacgatgtatatgtacctg
ctgaatttgcccgaacttgccgattacgatgtttccacgttgacgcgctgcacggtcggc
ggtcagaccatgccaccacaaaagatggaggaggtcgagcggaaatttggctccccgttg
cttgaattgtggggtatgactgagttgggaggactaggagcgacacatcccctgtacggt
ccgaaaaaaaacgggtcaatcggggttccgctgccgttattgaaagcgcggatcgcatcg
ttagaatcaccatctaaagaagtgacggctcgagaagtaggcgagcttcagatgaaaggc
cccatcaccatgatggggtattatggtcgtcccgaagcgactctggaaaccattgatgct
gacggctggctgcataccggcgacctcgcttatatagacgaggaaggattcatttttatc
gttgaccgcctgaaagatatggtcatcacgggtgggttcaatatctacccggcggaactg
gagcgtgtcctgtgtgagcatccatcgattgccctagctgcagtcgtgggtgtaccagat
gatattaagggagaactagcgaaggccttcattgtacgcaagcacggcgcggagataaga
acggaagatgtttttgagttttgtcgtcagaggttggctgcttacaaggtgcctcgtttg
atcgagtttgtagaggatctcccgaagaccaattcgggaaagatcttgcggcgcgagttg
agaaagaaggcactgcagtaa
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