KEGG   Paraburkholderia phymatum: Bphy_5208
Entry
Bphy_5208         CDS       T00704                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
bph  Paraburkholderia phymatum
Pathway
bph03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bph00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    Bphy_5208
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bph03400]
    Bphy_5208
DNA repair and recombination proteins [BR:bph03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Bphy_5208
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: ACC74291
UniProt: B2JMF6
LinkDB
Position
2:2334120..2335043
AA seq 307 aa
MAARSIASLSLSFGLVSIPVKLYSATESSSDVRFNLLAPDGSRVRQQYISESSGAVVERS
SMKKGYEFEKDRFVVFTADELKALEESASHVVEIVAFIPEKSIDPVYYDKAYYIAPDRRG
GKPYSLLQQALAESGRCALAKWASKGKTRIVQVRPSADGLVFQQLLFADEVRSMKDLNIE
HVDVSASELKLAMQIIEQGTEDHYDPAAYEDEEKKRILAAIDRKIEGKQVISNERADVPA
EGGEVIDLMEALRASLRGGAKAKPAAAPRRKAPEPVAGMAEATRARKPAARAPKSPAEAP
AKVRARK
NT seq 924 nt   +upstreamnt  +downstreamnt
atggcggcacgctcgattgcatcgttgtctctgtcgttcggcctcgtgtcgattcccgtc
aagctgtactccgcgaccgaaagctcgtccgacgtgcgcttcaatctgctcgcgcccgac
ggctcgcgcgtcaggcagcaatacatttccgaatcgagcggcgccgtggtcgagcgttcg
tcgatgaagaaaggttacgagttcgagaaagaccgtttcgtcgtatttaccgccgacgaa
ctgaaggcgcttgaagaaagcgccagccatgtggtcgagatcgtggccttcattccagaa
aaatcgatcgatcccgtctactacgacaaggcgtactacatcgcgcctgaccgtcgcggc
ggcaagccatacagtctgcttcagcaggcgctcgcggaaagcggccgctgcgcgttggcg
aagtgggcgtcgaagggcaagacgcgcatcgtgcaggtgcggccttccgccgacggcctg
gtgttccagcaactgttgttcgccgacgaagtgcgttcgatgaaagacctcaatatcgaa
cacgtcgacgtgtccgcgtcggagctcaagctcgcgatgcagatcatcgaacagggcacg
gaagaccattacgatcccgccgcgtacgaggacgaagagaagaagcgcattctcgcggcg
atcgaccgcaagatcgaaggcaagcaggtcatctcgaacgagcgtgccgatgtgcccgcc
gaaggcggcgaagtcatcgacctgatggaggcgttgcgcgcgagtctgcgtggcggcgcg
aaagccaaacccgctgcggcgcccaggcgcaaggcgcccgagcccgtcgccggtatggca
gaggcgacgcgagcccgcaagcccgcggcgcgtgccccgaagtcgcccgctgaagcgccg
gcgaaggtgcgggcacgcaagtga

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