Paraburkholderia phymatum: Bphy_5279
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Entry
Bphy_5279 CDS
T00704
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
bph
Paraburkholderia phymatum
Pathway
bph02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Bphy_5279
Enzymes [BR:
bph01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
Bphy_5279
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_8
GGDEF_2
Diguanyl_cycl_sensor
Cas10-Cmr2_palm2
Motif
Other DBs
NCBI-ProteinID:
ACC74359
UniProt:
B2JMW6
LinkDB
All DBs
Position
2:complement(2405426..2407426)
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AA seq
666 aa
AA seq
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MNDDHDQVLFARFGTSSPCWRLSSDSNALELTPETEDGAATVAIALSGAQAAEIRRLTGV
TSHLTMDVRLFGEALRLHLVGKKLNSSTWAGTASAYEDTESVARDLVHGLSFAEQVVSEV
NSVVVIVDRAGRIQRFNRLAEELTGMKEEDVIGRNVWALFMSSEAGAASSQNISGFFQHG
VAYEVERRVRTVHGERLFLFRNKFVMSGSGVDEQFLICSGTDITKERNAQERLSELANTD
SLTGLPNRNAIHDKTRAAIASAAPGNAVGILFLDLDNFKKVNDHYGHVFGDRLIQDVSSA
VRECLDGADTLARLGGDEFIVLSPVATVASMEAMAQRILERLRMPFSLGLVEVYTGCSIG
IAMFPEHGDSLEALIRAADTAMYVAKDDGKRTYRVFSPEMNRKVAEYMWLDTNLRRGLEE
GQLTLHYQPKLSLATGAVYGVEALVRWNSPERGQIMPAAFIRYAEESGLIGPLGRWVMQT
AAEQAAQWKARGLSLRVAINVSARQLVDTAVVSHFTEALQRAQLDPCLLDIELTESCLIE
DEAAAIDLITQFRDLGAQVHLDDFGTGYSSLSQLGRIPLDVIKLDRSFVSSINADSKSQA
LVRSMVAVAQALQLKVVAEGIETESEELFMKGLGVEYVQGYLYGKPMPAADFERWLHDRQ
KIPLIA
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgaccacgatcaggtgctgtttgcccgattcggaaccagcagtccttgctgg
cggctttcgagcgacagcaatgcgctcgaactcacgcccgaaacggaagacggcgccgcc
acggtcgcgattgcgctgtccggcgcgcaggctgcagagatccgccgcctcacgggtgtt
acctcgcacctgacaatggacgttcgcctgttcggcgaagcgctgcgtctgcacctcgtc
ggcaagaagctcaatagcagcacctgggcgggcacggcgtcggcgtacgaagacacggaa
tccgtcgcgcgcgacctcgtgcacggcctgtcgtttgccgagcaggtcgtgtcggaagtc
aattccgtggtggtgatcgtcgaccgggccggccgcatccagcgtttcaaccggctcgcc
gaagaactgacgggcatgaaagaagaagacgtgatcgggcgcaatgtgtgggcgctgttc
atgtcgtcggaagcgggcgcggcgtcgagccagaacatctccggtttcttccagcacggc
gtcgcgtatgaagtcgagcgccgcgtgcgcactgtgcacggcgagcggcttttcctgttt
cgcaacaagttcgtgatgagcggtagcggcgtcgacgagcagttcctgatctgctcgggc
acggacatcacgaaagaacgcaacgcccaggaacggctgtccgaactcgcgaataccgat
tcgctgacgggtctgcccaaccgcaacgcgatccacgacaagacccgcgcggcgatcgcc
agcgccgcgccgggcaacgccgtcggcattttgtttctcgatctcgacaacttcaagaag
gtcaacgaccactacggccatgtgttcggcgaccggctgatccaggacgtgtcgtcggcc
gtgcgcgagtgcctcgatggcgccgacacgctcgcgcgtctgggcggggacgagttcatc
gtgctgtcgcccgtcgcgacggtcgcgtcgatggaagcgatggcgcagcgcattctggag
cggctgcgcatgccgttcagtctggggctcgtcgaggtgtatacgggctgctcgatcggc
atcgcgatgtttcccgagcacggcgacagtctcgaagcgttgatccgcgccgccgacacg
gccatgtacgtcgcgaaggacgacggcaagcgcacctaccgcgtgttctcgccggagatg
aaccgcaaggtggccgagtatatgtggctcgacaccaatctgcggcgcgggctcgaagaa
ggccagctgacgctgcactatcagccgaagctgtcgctcgcgacgggcgccgtgtacggc
gtcgaggcgctggtgcgctggaattcgccggaacgcgggcagatcatgcccgccgcgttc
atccgttacgcggaagaatcggggctcatcgggccgctcggccgctgggtcatgcagacg
gcggccgaacaggctgcgcagtggaaggcgcgcgggttgtcgctgcgggtcgccatcaac
gtgtcggcgcggcaactcgtggatacggcggtcgtctcgcacttcaccgaggcgctgcaa
cgcgcgcagctcgacccttgcctgctcgatatcgagttgacggaaagctgcctgatcgaa
gacgaagcggctgccatcgacctgatcacacaattccgcgatctcggcgcgcaagtccat
ctggacgatttcggcacgggctattcgtcgctgtcgcagctggggcgcattcccctcgac
gtcatcaagctggaccgcagcttcgtgagctcgatcaacgcggacagcaaatctcaggcg
ctggtgcgctcgatggtggccgtcgcgcaggcgctgcaactgaaggtggtggcggaaggc
atcgaaacggagtcggaggagctgttcatgaaggggctgggcgtcgaatacgtgcagggc
tacctgtacggcaagccgatgcccgcggccgacttcgagcgctggctgcatgacaggcag
aagatcccgttgatcgcctga
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