Paraburkholderia phymatum: Bphy_5297
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Entry
Bphy_5297 CDS
T00704
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bph
Paraburkholderia phymatum
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bph03032
]
Bphy_5297
03400 DNA repair and recombination proteins [BR:
bph03400
]
Bphy_5297
Enzymes [BR:
bph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Bphy_5297
DNA replication proteins [BR:
bph03032
]
Prokaryotic type
DNA Topoisomerases
Bphy_5297
DNA repair and recombination proteins [BR:
bph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Bphy_5297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ACC74375
UniProt:
B2JMY2
LinkDB
All DBs
Position
2:complement(2433035..2434270)
Genome browser
AA seq
411 aa
AA seq
DB search
MKTMTPGAIDAIAQGLASGLSGSLPAGLRHADDTRPGFSRRKLRRGFAYFDLDGRRIDDE
QQIARINALAIPPAYTDVWICPDPRGHIQATGRDARGRKQYRYHPQWRETRDADKFGRMA
AFGQALPKIRARVARDLARKGMPREKVIAAVVHLLDTTLIRIGSVEYARDNQSYGLTTLR
KKHVTIRAGEVRFRFAGKSGIEHDVTVDNPRVKRIVRQCADLPGHELFQYVDEDGARHTI
GSADINDYLREVSHADFTAKDYRTWAGSVYAMAALRELVCESATDARRHVVATVKQVATL
LRNTPAVCRRCYIHPEVIAAFEAGELQALRACRPQRAKRHMKVDEIAFAALLAQAEKRAR
RAIRGARKDGKTPSAADVEKDIENRRLATLLRKSRALGKQTSARTRAANTA
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgatgacacccggcgccatcgatgcaatcgcacaaggactcgcgagcggacta
tctggcagcttgcccgcaggactgcggcacgcggatgatacgcggccgggcttcagtcgc
aggaagctgcgacgcggattcgcgtatttcgatctcgacggcaggcgcatcgacgacgaa
cagcagatcgcgcgcatcaatgcgctggccattccgcccgcgtatacggacgtgtggatc
tgccccgacccgcgcggccacatacaggcgacgggacgcgacgcacgcggccgcaagcag
tatcgctaccatccgcaatggcgcgaaacgcgcgacgccgacaagttcggccgcatggct
gcgttcggccaggcgctgccaaagattcgcgcgcgcgtcgcacgcgatctcgcacgcaag
ggcatgccgcgcgaaaaagtgattgcggccgtggtgcatctgctcgatacgacgttgatc
cgcatcggcagcgttgaatatgcgcgcgacaaccaatcgtatggactcacgacgctgcgc
aagaagcacgtgacgatacgtgccggtgaagtgcgcttccggtttgcgggcaaaagcggc
atcgaacacgacgtgacggtcgacaacccgcgcgtcaagcgcatcgtgcgccaatgcgcg
gacctgccgggccacgagctgttccagtatgtcgacgaagacggcgcgcgccatacgatc
ggctcagccgatatcaacgactatctgcgcgaggtcagtcatgcggacttcaccgcaaag
gactaccggacctgggcgggcagcgtgtacgcaatggccgcattgcgtgagctggtatgc
gagagcgcgaccgacgcgcgccgtcatgtcgtcgcgacggtgaagcaggtcgccacgcta
ttgcgcaacacgcctgccgtttgccggcgctgctatatccatcccgaagtgatcgccgca
ttcgaggcgggcgaattgcaggcattgcgggcttgccgcccgcagcgggcgaaacgtcac
atgaaggtcgatgagatcgcgttcgccgcgctgctcgcgcaggcggaaaagcgcgcgcga
cgggcaatccgtggcgcgcgcaaggacggcaagacgccctcggcagcggacgtcgaaaag
gacatcgagaacaggcggctcgcgacgctgctcagaaaatcgcgtgcactgggcaagcag
acgagcgcgcgaacacgcgccgccaacaccgcctga
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